Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1151 ATGAATAGTATCAACGACGACAGTTCCAGGCAAGATCTCGACCCTCAAAGTGACCACAGTTCTGACTATTTAGTCCACTCCCTTCCTCTCCAGCCCCAGCCCCAGCCTCGCCGCCCTCGTGGCTTTGCAGCCACGTCGGCGGCAGCTACCACCGCCCCCAATTCTGCTGGAAAAGGTAAGAAAGAGAGAGAGAAAGAGAAGGAGCGCACCAAGCTCCGAGAGCGTCACCGTCGAGCAATCACTAGCCGTATGCTCGCCGGCCTCCGTCAGTATGGTAATTTCCCTCTCCCGGCTCGTGCGGACATGAATGATGTGCTTGCCGCGCTCGCCCGCGAGGCTGGTTGGGTCGTTGAGGCAGATGGCACCACCTACCGTCAGTGCCCACCTCCTTCGCAAATGGCATCATTTGCTGCAAAGTCAGTTGAAACCCCGCTCCCTGCAGGTTCTTTAAGAGCTTGCGCTGCTAAAGAAACACTAGAGAATCAGCCACCAGTACTTAGAATTGATGAAAGCTTGTCACCTGCATCCATTGATTCTGTTGTAATTGCAGAGAGGGATTCAAAGAATGAGAAATATTCAAGTGCAAGCCCTATCAATACAGTCGACTGCTTGGAGGCTGACCAGCTTATGCAGGATATTCATTCTGGGGTTCATGAGAATGACTTCACGGGCACACCTTGTGTTCCTGTTTACGTAAAACTTCCAGCTGGTATTATTAACAAATTTTGCCAGTTGATTGATCCTGAAGGAATTAGACAGGAGCTAATTCACATGAAGTCTTTAAATTTTGATGGTGTTCTTGTGGATTGTTGGTGGGGCATTGTGGAAGGCTGGAGCCCACAGAAATATGTGTGGTCTGGCTATAGGGTACTTTTTGACATTGTTAGAGAAATGAAGTTGAAGTTACAGGTCGTTATGGCTTTTCATGTATATGGAGGGAATGATTGTAGTGATCCATTGATTGCCCTCCCACAATGGATTTTGGAGATTGGAAAAGTCAACCAGGATATTTTTTTCACAGATCGTGAAGGACGGAGGAATACTGAATGTCTTTCTTGGGGTATTGACAAAGAGAGAATTCTGAACGGAAGAACTGGAATCGAGGTCTATTTTGATTTCATGAGAAGCTTTCGGGCAGAGTTTAATGACTTGTTTGCGGAAGGCCTCATTTCTGCTGTAGAAATTGGACTTGGGGCATCTGGGGAGCTGAAATATCCTTCTTTTTCGGAAAGGATGGGATGGAGGTACCCTGGTATTGGTGAGTTTCAGTGTTATGATAAATATCTGCTACAAAGTCTACGAAGAGCAGCCAAATCACGTGGCCACTCATTTTGGGCTAGAGGGCCTGATAATGCTGGACAATACAATTCTATGCCACATGAAACTGGATTCTTTTGTGAACGGGGTGATTATGACAATTATTATGGGCGCTTCTTCTTGCATTGGTATGCCCAGTCATTAATAGACCATGCAGATAATGTTTTGTCTCTTGCAAGCCTGGCTTTTGAGGAAACAAGACTAATTGTCAAGGTTCCTGCTGTATACTGGTGGTACAAGACTACTAGTCATGCCGCAGAGTTGACAGCAGGATATCACAACCCTACAAACCAGGATGGATACTCTCCTGTTTTCGAGGTTCTGAAAAAACATGGTGTGACCATGAAGTTTGTCTGCTTAGGATTTCAGCTTTCTAGTCAGGAAGCGGACGAGTCATTGTCGGACCCAGAGGGCTTGACTTGGCAGGTATTGAACTCATCCTGGGATCGAGGGTTGATTGTAGCTGGAGAGAATGCAATACCATGTTATGATAGAGAAGGGTTCAAGAGACTAGTTGATATAGCGAAGCCAAGAAATGATCCTGATCGCCACCACTTTTCATTTTTTGCATATCAACAACCTTCCATGGTTCAGGGTAATATTTGCTTACCAGAGTTGGATCACTTCATCAAATGCATGCATGGTGAGATTACGGGGAATCTGTAA 1983 0.4594 MNSINDDSSRQDLDPQSDHSSDYLVHSLPLQPQPQPRRPRGFAATSAAATTAPNSAGKGKKEREKEKERTKLRERHRRAITSRMLAGLRQYGNFPLPARADMNDVLAALAREAGWVVEADGTTYRQCPPPSQMASFAAKSVETPLPAGSLRACAAKETLENQPPVLRIDESLSPASIDSVVIAERDSKNEKYSSASPINTVDCLEADQLMQDIHSGVHENDFTGTPCVPVYVKLPAGIINKFCQLIDPEGIRQELIHMKSLNFDGVLVDCWWGIVEGWSPQKYVWSGYRVLFDIVREMKLKLQVVMAFHVYGGNDCSDPLIALPQWILEIGKVNQDIFFTDREGRRNTECLSWGIDKERILNGRTGIEVYFDFMRSFRAEFNDLFAEGLISAVEIGLGASGELKYPSFSERMGWRYPGIGEFQCYDKYLLQSLRRAAKSRGHSFWARGPDNAGQYNSMPHETGFFCERGDYDNYYGRFFLHWYAQSLIDHADNVLSLASLAFEETRLIVKVPAVYWWYKTTSHAAELTAGYHNPTNQDGYSPVFEVLKKHGVTMKFVCLGFQLSSQEADESLSDPEGLTWQVLNSSWDRGLIVAGENAIPCYDREGFKRLVDIAKPRNDPDRHHFSFFAYQQPSMVQGNICLPELDHFIKCMHGEITGNL 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1151 660 Pfam Glycosyl hydrolase family 14 246 631 IPR001554 GO:0000272|GO:0016161
Lele54g1151 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 283 301 IPR001554 GO:0000272|GO:0016161
Lele54g1151 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 578 600 IPR001554 GO:0000272|GO:0016161
Lele54g1151 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 471 490 IPR001554 GO:0000272|GO:0016161
Lele54g1151 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 305 326 IPR001554 GO:0000272|GO:0016161
Lele54g1151 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 398 420 IPR001554 GO:0000272|GO:0016161
Lele54g1151 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 262 276 IPR001554 GO:0000272|GO:0016161
Lele54g1151 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 540 563 IPR001554 GO:0000272|GO:0016161
Lele54g1151 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 522 533 IPR001554 GO:0000272|GO:0016161
Lele54g1151 660 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 505 521 IPR001554 GO:0000272|GO:0016161
Lele54g1151 660 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 164 654 IPR001554 GO:0000272|GO:0016161
Lele54g1151 660 MobiDBLite consensus disorder prediction 57 74 - -
Lele54g1151 660 Pfam BES1/BZR1 plant transcription factor, N-terminal 57 204 IPR008540 -
Lele54g1151 660 Gene3D Glycosidases 218 659 - -
Lele54g1151 660 MobiDBLite consensus disorder prediction 1 74 - -
Lele54g1151 660 SUPERFAMILY (Trans)glycosidases 222 656 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1151 Lele-ChrLele54 17258850 17263959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1151 33 656 Glycoside Hydrolase AT5G45300 67.231 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lele54g1151 Glyco_hydro_14 6.8e-84 CL0058