Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1148 ATGCTAGACATTCTTAATGGCTTTGAGGCGTCAGAGCCTGGGAATTTAATAGTGGAGATTACCAAGAAAAGTGTTGTAAAGGCTATGAATCATCCGCCAGCATCATTTTCAATCACTCTCTCAAATCTTGACCTTCTTTCTGGTCGTTTTCCTGTGACATACTTGTATTTCTTTAGCACACCCAAACCATTAGTTCATGACTTTGGAGCACTTGTTGAGTCTCTCAAGAGCTCTTTAGCAGAAACACTTCATTATTACTATCCCTTTGCAGGCCAAATTATTCAGAACCCCAAAACTGAGGAGCCTGAAATCATCTGTGACAACAATGGAGCTCTGGTCATTGAAGCTCACGCCAATCTCCCGATGAAGAAACTAAATTTCCATAATCTCAATGAAACCATTCAGGATAAGCTAGTCTCTATTCAACCAGGCTTCCCTCTGCAAATTCAGGTAACAGATTACACTTGTGGAAGCATCTCTATAGCTTTCACTTTTGACCATGCATTGGGTGATGCAAGTTCCTTTGGTAAATTCATTGCCTCGTGGTCTGAAAGAGCACAAAATAAGCCCATTTCAATTCTCCCAGACCACAGTAGACGCCTTCAAGCTCGTTTTCCTCCCAAGTATCACCCATCAGTGGATCAAACTTTCATCAAGTGCACTATAGAAGAGATACAGAACATGCCAATGAACAACATAACGCTTAAGCGTCTTTATCACATTAATGCATCAAGTATTGATATGCTTCAGAGACTTGCATCTGCTGGTGGCACCAAAAGAACAAAGATTGAGGCTTTCTCTGCCTATGTATGGAAGATAATGATTGGAACCATGGATCAGAGGTACGAGAAATGCAAGATGGGTTGGTTAGTGGACGGAAGAGAAAAATTAGGAGTAAACGGTAGCAGGAATGGTATGTCAAATTACATAGGCAATGTCTTATCATTGGCTTTTGGGGAGGCAAGGGTTCAAGAGTTGAAGGAAGCTTCAATCTCAGAAACTGCCAAGATAGTGCATGAGGCTATTACAGAGGTGAACAATGAGGCCCATTTTTTGGATGTGATTGATTGGGTTGAGTGCCACAGGCCTGGCTTGATGCTAGCCAGGGCAGTGTTGGGTCAGGAAGGACCAGTCCTGGTTGTGTCCTCAGGAAGAAGGTTTCCAGTAACAGAAGTAGACTTTGGGTTTGGGAGTCCCTTGTTAGGGACAGTCTATACCTCCATTGAAAGGGTTGGGGTAGGTTATATGAACCAGAGGCAAAGTGGTAGGGGTGATGGCTCATGGACTGTCTCTGCTATCTTATGGCCAGAGCTGGCAGCTGCACTTGAGGTTGACCCTATTTTCCAGCCCATGTCTGCTTCTCATCTTCAACTCTAG 1377 0.4357 MLDILNGFEASEPGNLIVEITKKSVVKAMNHPPASFSITLSNLDLLSGRFPVTYLYFFSTPKPLVHDFGALVESLKSSLAETLHYYYPFAGQIIQNPKTEEPEIICDNNGALVIEAHANLPMKKLNFHNLNETIQDKLVSIQPGFPLQIQVTDYTCGSISIAFTFDHALGDASSFGKFIASWSERAQNKPISILPDHSRRLQARFPPKYHPSVDQTFIKCTIEEIQNMPMNNITLKRLYHINASSIDMLQRLASAGGTKRTKIEAFSAYVWKIMIGTMDQRYEKCKMGWLVDGREKLGVNGSRNGMSNYIGNVLSLAFGEARVQELKEASISETAKIVHEAITEVNNEAHFLDVIDWVECHRPGLMLARAVLGQEGPVLVVSSGRRFPVTEVDFGFGSPLLGTVYTSIERVGVGYMNQRQSGRGDGSWTVSAILWPELAAALEVDPIFQPMSASHLQL 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1148 458 Gene3D - 16 215 IPR023213 -
Lele54g1148 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 408 - -
Lele54g1148 458 Pfam Transferase family 18 437 - -
Lele54g1148 458 Gene3D - 219 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1148 Lele-ChrLele54 17242901 17244277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1148 18 401 Monolignol Biosynthesis Gene Families AT5G48930 24.384 5.31e-19 87.0