Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1137 ATGTTCGGAGGCGGCGAAGACGAGGCTTTGGCCCGCTTGGGCATCATGACGTCGTCCCTCCTCAAACCGGCTGCGTCGTCGGTGATTTCCGGTGAGATGTCACCGTCGACGGCAGCTCCTCCTGTGAGGGACGAGAGGGTTCCAGCGCTGCCACAGTGGAGCCAACAGGAGACGAGGGAGTTCATAGCGATCCGCGCGGAGCTGGAACGGGACTTCACTGCGTCTAAGCGAAATAAGACCCTCTGGGAGGTTGTCAGTAACAAGATGAGGGAGAGAGGCTTCAGGAGGAGTCCTGAACAGTGTAAATGCAAGTGGAAAAACCTTGTTAATCGTTATAAGGGGAAAGAGACATCAGATCCAGAGCATGGTAAACATTGTCCCTTTTTTGAAGAATTACATGCCATCTTTGCTCAAAGAGCACAGAACATGCAGCGGTTACTTCTTGAATCTGAGGCCCGTTCAACTCAGCCAAAGAAAGGGATGAAAAGGCCGAGCGGAGATCGGTCCTCAGAGGAATTCTCAGAAGATGATGATGAGGTTGAAGATGACAGTGAAGAGGAAAGACCTGTAAGAAGCAACTCTCGCAAAAGGAAAGCTGACAAGGTTGCAATGGAGAAGTCTTCCAAGGCAAGTAATGCATCAGATGCTATCAGCAGTACTGCCAATAGCATTCAGGAAATGCTTAAGGAATTTTTCCAGCAGCAGCTGAGGATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTGCTCATGAAAGACAGCTGTTTGAGCAGGAATGGAGGCAGTCAATGGAGAAGCTTGAGAGGGAGAGATTGATGATTGAGCAGGCATGGAGGGAGAGAGAAGAGCAGAGAAGAATAAGAGAAGAGAGCCGAGCAGAAAGGAGAGATGTACTGTTGACGACCCTTTTGAACAAGCTTATCCATGAATCTAATTAG 939 0.4963 MFGGGEDEALARLGIMTSSLLKPAASSVISGEMSPSTAAPPVRDERVPALPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSNKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGKHCPFFEELHAIFAQRAQNMQRLLLESEARSTQPKKGMKRPSGDRSSEEFSEDDDEVEDDSEEERPVRSNSRKRKADKVAMEKSSKASNASDAISSTANSIQEMLKEFFQQQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIEQAWREREEQRRIREESRAERRDVLLTTLLNKLIHESN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1137 312 MobiDBLite consensus disorder prediction 171 185 - -
Lele54g1137 312 ProSiteProfiles Myb-like domain profile. 53 109 IPR001005 -
Lele54g1137 312 Coils Coil 257 277 - -
Lele54g1137 312 MobiDBLite consensus disorder prediction 155 170 - -
Lele54g1137 312 FunFam Zinc finger and SCAN domain-containing 20 53 114 - -
Lele54g1137 312 Pfam Myb/SANT-like DNA-binding domain 52 135 IPR044822 -
Lele54g1137 312 Gene3D - 53 114 - -
Lele54g1137 312 SMART sant 49 111 IPR001005 -
Lele54g1137 312 PANTHER FI21293P1 45 309 - -
Lele54g1137 312 MobiDBLite consensus disorder prediction 186 205 - -
Lele54g1137 312 MobiDBLite consensus disorder prediction 150 218 - -
Lele54g1137 312 CDD GT1 51 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1137 Lele-ChrLele54 17185893 17187417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1137 34 312 Trihelix Transcription Factor Family AT2G38250 43.110 6.93e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele54g1137 Myb_DNA-bind_4 1.2e-22 CL0123