Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1133 ATGTCACTTCTCAGCAGATTCTTTTACAGGAGACCCCCTGATGGTTTGCTGGAATTTGTCGATAGAGTATACGTTTTCGATTCCTGCTTTTCCACGGAGGCATTGCCTGATGGAATGTACCAAATATATTTACATGAAATCATTACCGAGTTACATGAAGAATTCCCGGACTCTTCCTTTTTCGCTTTTAATTTTCGTGAAGGGGAGAAACGCAGTCAATTTGCTGAAATTCTTTGTGAATACGATGTTACTGTGATGGATTATCCGCGACAGTATGAGGGTTGCCCTATTCTTCCAGTGTCTTTAGTTCATCATTTTCTTCGTGTTTGTGAGAGTTGGCTTTCACTTGGAAATCAACAGAATGTTATCCTTCTCCACTGTGAGAGAGGAGGTTGGCCTCTCTTGGGGTTTCTTTTAGCTAGCTTTCTAATTTATGGAAGACTACACAGCGGTGAACGGAAGACACTTGAAATGGTGCATAGAGAGGCACCCAAAGGTTTCTTACAGCTATTGTCGCCTTTGAACCCGTTGCCATCTCAACTTCGTTATGTTCAGTATGTAGCAAGAAGGAACATAGCTCCTGAGTGGCCGCCGCCTGAGAGAGCGCTTTCTCTAGATTGTGTCATTCTCAGAGCCATTCCTAGTTTTGATTCCCAGAACGGATGCAGGCCCATGATCCGAATTTTTGGTAGAAATTTTCTCAGCAAGGGTGGGCTTTCTACTCAGATGCTTTACTCCATGCACAAGAAAAAGAAAACCTTAAGGCACTACTGTCAGGCAGACTGTGATGTGATCAAGATTGACATACAATGTTTAGTACAAGGAGATGTGGTATTGGAGTGTGTCCATTTGGACTTGGATCCAGAAAGGGAAGTGATGATGTTTCGCGTAATATTCAACACGGCATTTATTCGATCCAACATATTGATGCTGAATACTGAAAACCTGGACATTCTCTGGGACTCAAAGGAGCGGTATCCAAAAGGCTTCCGAGCTGAGTTTTTGTTTGGGGATGTTGAGAGCATATCTCCTCCAAAAGCCCCAACAACTGTATTAAATGGCGAGGAGAAAGGTGGATTGCCCATTGAAGCTTTTTCAAGGGTTCAAGAACTTTTTAGTGGTGTGGAGTGGCTCGACAGTGGTGAAGATGCTGCAGTATGGTTGCTTAAACAACTTTCTGTGTTAAATGATGTTAAAGAGCTTTCAAGGTTGCAAGGTAAAGCAAGTTGGTACTCATCACCTGCTGACTCTGAAGATGAAAATAATGAATCAAGCACTGCTGATAGTTCAGATGAAGCCTTTGATGTTATTCCAAAGTCTTCTACTGATATTTCCAAGTTATTGGCACCTGACAACCCTGATTCAATCCATTTAGATTTTGAAAGTGATGGTAGAAATATTGTACACCTTACATCAGAACCTCCAGATCCATCAACTGGAAGTGTTCAACTGTCGCATCACGCTATTTGTAATGAATATCCTTACAATTCATCTCCACCGTCACCACCACCAGCACCTTCTCCACTTTGTCCACCTCTTTCTAATATCAGTGGAGATCCTTGCACTTCTCCTACAGCATCATCAGCAAATTGCAAGAGACCAATACCACCCCCTCCGCCACCACCTCCTCCTCCTCCACCATCAAACATTTCAACTTCATCTAATGTTAAGCCCCTCCAAGTGGCAAGACCTCCATCACCACCACCACCTCCTCCCTCCCCTCCTGTTCTAGCTCATAATGCTCCTACACCCCCTCCACCTCCACCTCCACCACGACCTCCTATGGCAAAGCCTCTAAATGCGCCTCTTCCACCACCCCCACCTAGTCAAGTTACAATACCACCTCCTCCACCACCACCTAATCGAGGTGCAATGCCACCACCACCTCCACCTCCACCTCCTCCACCTGGTCGAGATGCAGTGCCACCTCCACCTCCGCCACCTCCGCCTCCTCCACCACCACCTAATCGAGGTGCAATGCCGCCACCACCTCCACCTCCACCTCCACCTCCTCCACTCGGTCAAGATGCATCGCCACCTCCGCCTCCAATACCTAGTCGAGGAGTAATACCACCTCCACCTCCTCCTCCACCACCACCTGGTCGAGGTGCAATGCCACCGCCACCGCCACCACCATCTGCTCATGACACAAAGCCATCTCCACTGCCGCCACCACCTAGTCAAGGTGCAACACCACCTCCACCTCCACCTCCACCACCGCCACCCAGTTGGGGTGCAGCACCGCCTGCACCTCCACCACCCAGTCGGGGTGTAGCACCACCCCTACCTCCACCACCTGTTCGAGGTGCAGCACCACCTCCGCCTCCACCACCTGGTCAGGGTGCACCACCACCTCCTCCCCCTCTTGTAGCTAAGGGATCTGGTGTGCCGCCACCACCCCCATCCACTGCCAAAGGTAAACCTTTAGCATCAACAAATATTGGAAGAGGTCGAGGTTCTAGTGGCATTGCTAATGCCCCTAAGAAAGCTTCATTAAAGCCCCTACATTGGGTGAAAGTTACACGAGCAATGCAAGGGAGTCTATGGGCTGATTCATCCAAACAAGATAATCAATCAAGGCCCCCTGAAATTGATATATCAGAACTTGAGAGTCTGTTTTCAGCAGCATCTGCTTCTGATGCGAGCAGTGCTAAAGGTGTAGGTCGGCGTGGTTCTAATATCAATAAACCTGAGAAAGTTCAATTGATTGACTTGCGAAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCCTTGCCAGACATGCTTAATGCAGTTCTGGCTTTGAATTCTTCTACTTTAGACATTGATCAGGTTGAGAATCTTATCAAGTTCTGTCCCACAAAGGAAGAAATGGAAATGTTCAAGAATTACACTGGGAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTCATGGAGTTGATGAAGGTTCCACGAGTTGAAGCTAAATTACGAGTTTTTGCTTTTAAAATCACCTTTTCTAGTCAGGTGAATGATTTGAGATTAAATTTGAACACAATCAATGATGCCGCTAGGGAGGTGAAAGAATCTATGAAGTTGCGTCAAATAATGCAGACTATTCTTACTTTGGGCAATGCCTTAAATCAGGGAACAGCACGAGGATCTGCAGTAGGATTCAAATTAGATAGCCTTCTTAAATTATCTGATACTCGGGCAAGGAATAACAAAATGACTTTGATGCATTATTTGTGTAAGCTTCTTTCTGAGAAAATGCCAGAATTGCTAGATTTTGGCAAGGATCTTGTTCATTTGGAAGCAGCTTCAAAGATCCAACTAAAAGCATTGGCTGAAGAGATGCAAGCGGTTAGCAAAGGTCTGGAAAAAGTTGAGCAAGAACTTACTGCGTCAGAAAATGATGGTGTTATATCTGCAGGCTTCCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGAAGTGAGGTCACTCATATCATTGTATTCTGAAGTGGGCAGAAATGCAGACTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCTCGGTGCCCCTTTGAGCAAGTGACTCAAGTCCTGGTTGTCTTCGTGAAGATGTTCAACAAATCAAGGGAGGAGAACGAAAGGCAGGCAGACGCTGAAAGGAAGAAATTGGAGAAAGAAGCCATGAAGGAACAGCGAACACCTGTAAATACAAATTTAAAAAAAGATGTTCACTAG 3708 0.4566 MSLLSRFFYRRPPDGLLEFVDRVYVFDSCFSTEALPDGMYQIYLHEIITELHEEFPDSSFFAFNFREGEKRSQFAEILCEYDVTVMDYPRQYEGCPILPVSLVHHFLRVCESWLSLGNQQNVILLHCERGGWPLLGFLLASFLIYGRLHSGERKTLEMVHREAPKGFLQLLSPLNPLPSQLRYVQYVARRNIAPEWPPPERALSLDCVILRAIPSFDSQNGCRPMIRIFGRNFLSKGGLSTQMLYSMHKKKKTLRHYCQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVIFNTAFIRSNILMLNTENLDILWDSKERYPKGFRAEFLFGDVESISPPKAPTTVLNGEEKGGLPIEAFSRVQELFSGVEWLDSGEDAAVWLLKQLSVLNDVKELSRLQGKASWYSSPADSEDENNESSTADSSDEAFDVIPKSSTDISKLLAPDNPDSIHLDFESDGRNIVHLTSEPPDPSTGSVQLSHHAICNEYPYNSSPPSPPPAPSPLCPPLSNISGDPCTSPTASSANCKRPIPPPPPPPPPPPPSNISTSSNVKPLQVARPPSPPPPPPSPPVLAHNAPTPPPPPPPPRPPMAKPLNAPLPPPPPSQVTIPPPPPPPNRGAMPPPPPPPPPPPGRDAVPPPPPPPPPPPPPPNRGAMPPPPPPPPPPPPLGQDASPPPPPIPSRGVIPPPPPPPPPPGRGAMPPPPPPPSAHDTKPSPLPPPPSQGATPPPPPPPPPPPSWGAAPPAPPPPSRGVAPPLPPPPVRGAAPPPPPPPGQGAPPPPPPLVAKGSGVPPPPPSTAKGKPLASTNIGRGRGSSGIANAPKKASLKPLHWVKVTRAMQGSLWADSSKQDNQSRPPEIDISELESLFSAASASDASSAKGVGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMLNAVLALNSSTLDIDQVENLIKFCPTKEEMEMFKNYTGNKEMLGKCEQFFMELMKVPRVEAKLRVFAFKITFSSQVNDLRLNLNTINDAAREVKESMKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLSEKMPELLDFGKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGVISAGFRKVLKNFLDIAEAEVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQVLVVFVKMFNKSREENERQADAERKKLEKEAMKEQRTPVNTNLKKDVH 1235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1133 1235 MobiDBLite consensus disorder prediction 561 805 - -
Lele54g1133 1235 Gene3D - 197 342 - -
Lele54g1133 1235 Coils Coil 1103 1130 - -
Lele54g1133 1235 MobiDBLite consensus disorder prediction 1202 1235 - -
Lele54g1133 1235 MobiDBLite consensus disorder prediction 493 828 - -
Lele54g1133 1235 Pfam Formin Homology 2 Domain 827 1197 IPR015425 -
Lele54g1133 1235 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Lele54g1133 1235 Gene3D Formin, FH2 domain 824 1208 IPR042201 -
Lele54g1133 1235 Coils Coil 1001 1021 - -
Lele54g1133 1235 MobiDBLite consensus disorder prediction 531 551 - -
Lele54g1133 1235 MobiDBLite consensus disorder prediction 516 530 - -
Lele54g1133 1235 SMART PTEN_C2_2 198 338 IPR014020 -
Lele54g1133 1235 MobiDBLite consensus disorder prediction 409 433 - -
Lele54g1133 1235 MobiDBLite consensus disorder prediction 496 513 - -
Lele54g1133 1235 PANTHER FORMIN-J 732 1223 - -
Lele54g1133 1235 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Lele54g1133 1235 SUPERFAMILY Formin homology 2 domain (FH2 domain) 783 1216 - -
Lele54g1133 1235 ProSiteProfiles Formin homology-2 (FH2) domain profile. 822 1222 IPR015425 -
Lele54g1133 1235 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 338 IPR035892 -
Lele54g1133 1235 SMART it6_source 532 1233 IPR015425 -
Lele54g1133 1235 Coils Coil 1197 1224 - -
Lele54g1133 1235 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Lele54g1133 1235 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 18 187 IPR029021 -
Lele54g1133 1235 FunFam Formin-like protein 821 1208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1133 Lele-ChrLele54 17135375 17143802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1133 779 1206 FH2 protein (formin) Gene Family AT1G31810 77.804 0.0 664