Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1129 ATGGTTAAGCACAATAATGTTATCCCTAGCAGCCACTTCCGGAAGCATTGGCAAAATTATGTGAAGACATGGTTCAATCAACCTGCACGGAAGACAAGAAGACGTTTAGCTCGCCAAAAGAAAGCTGTCAAGATTTTCCCTAGGCCTACAGCTGGGCCTCTGAGACCTATTGTTCATGGCCAAACTTTGAAATACAACATGAAGGTCAGAGCTGGCAGAGGATTTTCACTTGAAGAGCTGAAGGCTGCTGGCATTCCCAAGAAGCTTGCTCCAACCATTGGCATTTCTGTTGATCACCGCCGAAGGAATCGTTCTTTGGAAAGTCTTCAAGCGAATGTCCAGAGGCTGAAAACATACAAGGCCAAGCTTGTTGTGTTCCCAAGACGTGCACGCAAGGTCAAGGCTGGTGATTCAACACCCGAGGAGCTGGCAAATGCCACACAAGTCCAGGGTCCATTCATGCCTATTGTGAGGGAGAAGCCATCAGTGGAGCTTGTTAAGGTTACTGATGATATGAAGGCATTTAAAGCTTATGAGAAGCTTCGCCTTGAACGCACAAACAAGAGACACGTTGGTGCCAGGCTGAAGAGGGCTGCTGAAGCAGAGAAGGATGAAAAGAAGTGA 624 0.4728 MVKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRLARQKKAVKIFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGISVDHRRRNRSLESLQANVQRLKTYKAKLVVFPRRARKVKAGDSTPEELANATQVQGPFMPIVREKPSVELVKVTDDMKAFKAYEKLRLERTNKRHVGARLKRAAEAEKDEKK 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1129 207 FunFam 60S ribosomal protein L13 166 207 - -
Lele54g1129 207 Hamap 50S ribosomal protein L13e [rpl13e]. 45 128 IPR001380 GO:0003735|GO:0005840|GO:0006412
Lele54g1129 207 Gene3D - 167 207 - -
Lele54g1129 207 Pfam Ribosomal protein L13e 7 185 IPR001380 GO:0003735|GO:0005840|GO:0006412
Lele54g1129 207 ProSitePatterns Ribosomal protein L13e signature. 70 84 IPR018256 GO:0003735|GO:0005840|GO:0006412
Lele54g1129 207 PANTHER 60S RIBOSOMAL PROTEIN L13 1 206 IPR001380 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1129 Lele-ChrLele54 17109470 17110525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1129 2 192 Cytoplasmic Ribosomal Protein Gene Family AT3G49010 84.817 1.61e-125 351