Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1123 ATGCATAATAGCTACGGTTCAATTATGTATGTGCAGATGAAGGACATGGCCCTTAAGTTTTCAGGTGCCTATAAGCAATGCAAACCGTGCACAGGATCCAGTAGTTATAAGAAAGGGCAGAGACCTTATCCAGATTTTGATACCATCTCTGAAGGAGTTCCATACCCTTATATAGGAGGGGCAAGCTCAAGTTCAATCCCTGCATGGGACTTCATCGGCTCGCATTACCCGGCTGATAGATCTGACCAGAGATTTGTTGGGTCATTTTCCGGTGACCGAACCCCAAGAGGACGCGAATCGGCATCAGCCTGTGATGTGGTGTTGGAAAAAGAGGATGAGCCCAAGGAGTGGATGGCACAGGTGGAGCCAGGGGTTCACATTACATTTGTATCTCTTCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATGTTTGATAAATCGCAAGCTCAAAGATGGTGGGGTGAGAATTACGATCGAATCATGGAGCTCTATAATGTCCAGAGATTCAATCGACAAATCAACACTCCTACAAGATCTGAAGACGAGCAAAGAGATTCTTCTTACTCGAGACTGGGGTCCGCAAGAGACAGCCCCATGGGCTCATCTTTAAACAAAGAATGGACGCCAAGGAACTATCCTAAAACCCCAGGAAACAACAGAGGGTACTTCCCATCTGAACTATCGGATCAAGGTGGAGGACCCCATTTCCTCAGAGGGTCTTCGTTTGAAGCATCGCGCACGACAACCTCTTCTAGAGATGAACCTTCTGTTAGCAATGGCAGTGACATGGAGGCAGAATGGGTAGAGCAAGATGAGCCCGGAGTTTACATTACTATCAGACAGTTACCGGACGGCACAAGGGAGCTTCGACGTCTCAGATTCAGCCGCGAAAGATTCGGTGAGATACATGCCAAGAATTGGTGGGAGGAGAACAGAGAAAGAATACAAGCTCAATACCTTTGA 978 0.4714 MHNSYGSIMYVQMKDMALKFSGAYKQCKPCTGSSSYKKGQRPYPDFDTISEGVPYPYIGGASSSSIPAWDFIGSHYPADRSDQRFVGSFSGDRTPRGRESASACDVVLEKEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFDKSQAQRWWGENYDRIMELYNVQRFNRQINTPTRSEDEQRDSSYSRLGSARDSPMGSSLNKEWTPRNYPKTPGNNRGYFPSELSDQGGGPHFLRGSSFEASRTTTSSRDEPSVSNGSDMEAEWVEQDEPGVYITIRQLPDGTRELRRLRFSRERFGEIHAKNWWEENRERIQAQYL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1123 325 ProSiteProfiles BRX domain profile. 115 170 IPR013591 -
Lele54g1123 325 MobiDBLite consensus disorder prediction 179 267 - -
Lele54g1123 325 MobiDBLite consensus disorder prediction 246 263 - -
Lele54g1123 325 Pfam Transcription factor regulating root and shoot growth via Pin3 269 324 IPR013591 -
Lele54g1123 325 Pfam Transcription factor regulating root and shoot growth via Pin3 115 169 IPR013591 -
Lele54g1123 325 ProSiteProfiles BRX domain profile. 270 325 IPR013591 -
Lele54g1123 325 MobiDBLite consensus disorder prediction 195 220 - -
Lele54g1123 325 MobiDBLite consensus disorder prediction 180 194 - -
Lele54g1123 325 Pfam Transcription factor BRX N-terminal domain 12 30 IPR027988 -
Lele54g1123 325 PANTHER PROTEIN BREVIS RADIX-LIKE 1 12 325 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1123 Lele-ChrLele54 17047859 17049261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1123 9 325 Major Intrinsic Protein MIP AT1G31880 65.325 1.45e-142 405