Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1120 ATGAACTCTCTGCCGATGTGGATGGCGGTCCAACCACCGTTCACGGTGGCGCAATGGCAGGAGCTTGAACACCAAGCTCTCATCTTTAAGTACCTCAAGGCTGGACTGGCCGTTCCCCTCGACCTCCTCATTCCCATTCGCAGGAGTCTCGAATTGATACCGCCCAAGTTCGTTCATCACCCGACTTTGGGTTATTGTTCGTATTACGGGAAGAAGATCGACCCAGAGCCGGGGAGGTGTCGAAGGACGGATGGGAAGAAGTGGAGATGCTCGAGAGATGCGCATCCGGACTCTAAGTATTGTGAACGGCACATGATACGCCGTCGTAACCGTTCAAGAAAGCCTGTGGAATCGCAACAAGCTGCTTCTCAGTCTTCGTCCAATTCGGCATCGGACGTTGCTGCTGCTGGGAGCAGAAGTGGCTCTGGAAGCTTCCAGAGCTTGCCCTTGCACGGAAATGGTGCTCGTGAGGGTTTGAACCTAGGAAATAACGTATCACAGCTTCAGATACAGTCTCTTCCTAGTGAGATTAGCAAGAAAGATTACAGGTTCGGACTGAATTCTGAAGCGGACGAGCACAACTTCTTACAGAAAGGATTGGGAACCACAAGCTATCTCAGTTTCGACTCGACCTCAGATAACATGTGGCCTCATATCTCACAAATTCCCTCGGACCTCGTCTCAGAGTCAAGAAATAGTTCTGCTACTATTGTTAGCAGCTGCTTCCAGTTGGGGACCATGCGAGATACTGAGCCACTGAACATGAATGCTGCAAGATCAAAGCGACATTTCTATGGTGATCAGCTTAGTTTGGCTGGGTGTTTGAAACAGGAATATCAGTCGCCAGAGACTTTTTCAACTGACTGGCTCTGGAAGAACTCGAGCTCCCCCTCTGTTGAGTATAATAGATCCAATAAAGATTCTAGCTGTAACCCTGATAGTATGAATCCCTTTCAGTGA 960 0.4927 MNSLPMWMAVQPPFTVAQWQELEHQALIFKYLKAGLAVPLDLLIPIRRSLELIPPKFVHHPTLGYCSYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCERHMIRRRNRSRKPVESQQAASQSSSNSASDVAAAGSRSGSGSFQSLPLHGNGAREGLNLGNNVSQLQIQSLPSEISKKDYRFGLNSEADEHNFLQKGLGTTSYLSFDSTSDNMWPHISQIPSDLVSESRNSSATIVSSCFQLGTMRDTEPLNMNAARSKRHFYGDQLSLAGCLKQEYQSPETFSTDWLWKNSSSPSVEYNRSNKDSSCNPDSMNPFQ 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1120 319 PANTHER GROWTH-REGULATING FACTOR 5 12 289 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele54g1120 319 MobiDBLite consensus disorder prediction 116 149 - -
Lele54g1120 319 MobiDBLite consensus disorder prediction 294 319 - -
Lele54g1120 319 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele54g1120 319 Pfam WRC 75 117 IPR014977 -
Lele54g1120 319 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele54g1120 319 ProSiteProfiles WRC domain profile. 74 118 IPR014977 -
Lele54g1120 319 MobiDBLite consensus disorder prediction 101 151 - -
Lele54g1120 319 Pfam QLQ 13 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1120 Lele-ChrLele54 17021330 17023874 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1120 11 120 GRF Transcription Factor Family AT3G13960 58.772 8.59e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele54g1120 WRC 4.6e-20 No_clan