Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1113 ATGGAGAGGGGATATGGAGGAGGAGGGAATTTTGGGTTTGAGGATGCGGTGGTGATGACCAGAGATCCGAAGCCAAGGCTCAGATGGACGGCTGATCTTCATGATCGATTTGTCGATGCCGTCACCAAGCTTGGTGGCCCCGACAAAGCGACTCCCAAGTCTGTGTTGAGACTGATGGGCTTGAAAGGCTTGACTTTGTATCATTTGAAGAGTCATTTACAGAAATATAGACTTGGACAGCAGGCACGGAAGCAAAACAGTGAAGAACAACACAAAGATAACAATAATAAAGGTGCAGATGTACATTTTAGTGATCGTTCTTCGGGGCCTAACGCCAATTACAGAGGCAATAACCAAACAGAGGAAATCCCATTAGCAGAGGCACTGAAGCGTGGGGTCGAAGTCCAAAAGCAATTGGAAGAGCAGCTTGAGGTACAGAAGAAATTGCAGATGAGAATAGAGGCTCAAGGGAAGTATTTGCAAGCCATGCTTGAGCAAGCACAGAAGAGCTTTTCACTGGACATGAATGGATCAAACAACCTAGAAGCAGCAAGATCTCAATTGACAGACTTCAACTCTGCTTTGTCCAATTTCACGGAGAATATTAACAGAGACAACAAAGAAAACATCATGGACATGAATGATTTCTACAAGAAAGCTCACAGTTCATCGGCTTTCGGAATTTACCAGGAAGCAGAAGGAGAAGACCGCAAGGATCAAAAGCCCAAGGCTGAAGAAGGTTCAATACAGTTTGACTTAAACATCAAAGGTAGCTATGACTTTGTATCAGCAGGTGCAGCTGAAATGGATTCCAAGATGCTTTCATACAGAGTGTAA 837 0.4421 MERGYGGGGNFGFEDAVVMTRDPKPRLRWTADLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNSEEQHKDNNNKGADVHFSDRSSGPNANYRGNNQTEEIPLAEALKRGVEVQKQLEEQLEVQKKLQMRIEAQGKYLQAMLEQAQKSFSLDMNGSNNLEAARSQLTDFNSALSNFTENINRDNKENIMDMNDFYKKAHSSSAFGIYQEAEGEDRKDQKPKAEEGSIQFDLNIKGSYDFVSAGAAEMDSKMLSYRV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1113 278 Pfam Myb-like DNA-binding domain 27 77 IPR001005 -
Lele54g1113 278 Gene3D - 23 81 - -
Lele54g1113 278 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 81 IPR017930 -
Lele54g1113 278 FunFam Myb family transcription factor 23 81 - -
Lele54g1113 278 MobiDBLite consensus disorder prediction 78 118 - -
Lele54g1113 278 Pfam MYB-CC type transfactor, LHEQLE motif 124 170 IPR025756 -
Lele54g1113 278 MobiDBLite consensus disorder prediction 82 100 - -
Lele54g1113 278 Coils Coil 136 156 - -
Lele54g1113 278 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 15 229 IPR044848 GO:0003700
Lele54g1113 278 Coils Coil 277 278 - -
Lele54g1113 278 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 24 79 IPR006447 GO:0003677
Lele54g1113 278 SUPERFAMILY Homeodomain-like 24 81 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1113 Lele-ChrLele54 16982580 16984696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1113 5 191 G2-like Transcription Factor Family AT4G13640 51.295 2.07e-60 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele54g1113 Myb_DNA-binding 2.1e-07 CL0123