Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1094 ATGGGTTACGAAAACGATCCGTATCGCGATGAGGATGGAGAACCATTGATGGACTATGATGACGTGCAATCCGATCGCGAGCTCTCTCCTGAACCCCAACGGCAAGGACTATTCGACGGTTTGGAGGAAGACGTCGATGATTGGCGTGGGCGAGAACGATCGCAAACTCCGGTCTACGATAATGATTCGTCCATGTCAAAGGCGAAGCCTAGGAAGAGGCTTATCAAGAAAATTGACGCTGGGAGCCAGTCTGTGGCTCCGGATCTTGCTGATGAGGATGAGGAAGCGGATCCGGCAAGTTTTGTGAGGGACGGGTCTGAGGAGGGGGAAGGAAGAAAGAGGAAGGGGAAGGATGGTGGCAGTGGGAAGAAGGAGAAGAGGTACAAGGGGGAGAAGAGGTTAGGGAGTAGTAATAAAGGCAGCTCAAAATCTGGGTTATCCAAGAAAGGGTTTGCGGCTAAGGCAGGAAAGGATCATGATGGCGATGTCAAGGAGATGTGGGATACAATTGCTGGCGGGGACTCTGAGGATGACCAGGAGGGCGTCAGGACAGTCGATGATGATAATTTCATAGATGACACTGGAGTGGAGCCTGCTTTATACGGTAGTGATAATGAAGCTCGTTCTCCTGGTCAATATGCCCAGGCAGAGGAAGGTGAGGAGGATGATGAGATCAAGGAACTTTTTAAGATGGGTAAGAAGAAGAAGAAGAATGAGAGAAGTCCTGCAGAGATAGCTTTGCTAGTTGAGAATGTCATGGCTGAACTTGAGGTTACAGCTGAAGAAGATGCTGAATTCAATAGACAGGGGAAGCCTGCAATAAATAAGCTGAAGAAGTTGCCTCTTTTAACTGAAGTCCTCTCAAAGAAACAACTTCAACAGGAGTTTTTAGATCATGGAGTGTTAACTTTATTGAAGAATTGGCTTGAACCCCTCCCAGACGGAAGCTTACCAAACATAAACATCCGCACGGCAATTTTGAATATTTTGAATGATTTTCCTATAGACCTTGAGCAGTATGATAGAAGAGAACAGCTGAAGAAGAGTGGTCTCGGAAAGGTCATTATGTTTTTGTCAAAATCTGATGAAGAAATCAATGTAAATAGGAAACTAGCAAAGGAGCTGGTTGATAAATGGAGCCGACCTATATTTAACAAGAGTACAAGATTTGAAGACATGAGAAATGTGGAGGATGACAGGATTCCTTTCAGAAGGCCATCAGTGAAGAAGCCTGCAAATAAAGCTTCAGGAATCGAATCTAGAGATGGGGATCTTGATTTGGAATTTTCACAGCGGAAGTCTGGACAATCCTCTACCAGACAACTCACAACTAGGCCAGAAGCAGCACCGTTGGATTTTGTGGTGCGGCCCCCATCTAAAGTTGACCCAGAAGAAGTTAGGGCCCGTGCAAAACAAGCTGCACAAGATCAGTACCGTATGAAGATGAATAAGAAGCTACAGCAATTGAGGGCTCCCAAAAAGAGGCAGCTTCAAGCCACTAAGTTGAGTGTCGAAGGTCGGGGTATGACGAAGTATTTGTAA 1542 0.4591 MGYENDPYRDEDGEPLMDYDDVQSDRELSPEPQRQGLFDGLEEDVDDWRGRERSQTPVYDNDSSMSKAKPRKRLIKKIDAGSQSVAPDLADEDEEADPASFVRDGSEEGEGRKRKGKDGGSGKKEKRYKGEKRLGSSNKGSSKSGLSKKGFAAKAGKDHDGDVKEMWDTIAGGDSEDDQEGVRTVDDDNFIDDTGVEPALYGSDNEARSPGQYAQAEEGEEDDEIKELFKMGKKKKKNERSPAEIALLVENVMAELEVTAEEDAEFNRQGKPAINKLKKLPLLTEVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIRTAILNILNDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEEINVNRKLAKELVDKWSRPIFNKSTRFEDMRNVEDDRIPFRRPSVKKPANKASGIESRDGDLDLEFSQRKSGQSSTRQLTTRPEAAPLDFVVRPPSKVDPEEVRARAKQAAQDQYRMKMNKKLQQLRAPKKRQLQATKLSVEGRGMTKYL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1094 513 MobiDBLite consensus disorder prediction 152 190 - -
Lele54g1094 513 Pfam TFIIS helical bundle-like domain 329 383 IPR017923 -
Lele54g1094 513 MobiDBLite consensus disorder prediction 487 513 - -
Lele54g1094 513 MobiDBLite consensus disorder prediction 99 136 - -
Lele54g1094 513 MobiDBLite consensus disorder prediction 402 447 - -
Lele54g1094 513 ProSiteProfiles TFIIS N-terminal domain profile. 303 386 IPR017923 -
Lele54g1094 513 MobiDBLite consensus disorder prediction 415 429 - -
Lele54g1094 513 MobiDBLite consensus disorder prediction 37 56 - -
Lele54g1094 513 MobiDBLite consensus disorder prediction 430 445 - -
Lele54g1094 513 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 296 386 IPR035441 -
Lele54g1094 513 PANTHER PROTEIN IWS1 HOMOLOG 1 1 513 IPR044204 GO:0009742|GO:0032784
Lele54g1094 513 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 242 389 IPR035441 -
Lele54g1094 513 MobiDBLite consensus disorder prediction 1 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1094 Lele-ChrLele54 16859282 16862347 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lele54g1094 Med26 3.2e-13 No_clan