Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1093 ATGCCTATCTCTGCTGCTGGTGCTCCTGGAGCAGTTCCTGGTCTCACGACAAACTTAAATATAGGAATGGATTATTGGGGAGCACCAACTTCAACTATTCCTGTGCTACATGGAAAGGTTCCCTCTACTGCAGTTGCTAAGGGGATGGTTACTACTGGATCACAGGATGAAAGAGCGCTTAAAAGACACAGGCGGAAGCAATCTAATAGGGAATCTGCTCGCAGATCCAGGTTACGCAAGCAGGAGAGACTGGGGGAATTACCTGGCAAAGAAGATCTTGGGTCTTGCCGGAATGATGAACCTCAACAGACTGGGCAAGAGGAGGATGTGAAGGGTGGTCATTAG 345 0.487 MPISAAGAPGAVPGLTTNLNIGMDYWGAPTSTIPVLHGKVPSTAVAKGMVTTGSQDERALKRHRRKQSNRESARRSRLRKQERLGELPGKEDLGSCRNDEPQQTGQEEDVKGGH 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1093 114 SMART brlzneu 57 112 IPR004827 GO:0003700|GO:0006355
Lele54g1093 114 PANTHER G-BOX-BINDING FACTOR 3-RELATED 8 90 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lele54g1093 114 Pfam bZIP transcription factor 57 90 IPR004827 GO:0003700|GO:0006355
Lele54g1093 114 MobiDBLite consensus disorder prediction 74 114 - -
Lele54g1093 114 Pfam Disordered region downstream of MFMR 1 33 - -
Lele54g1093 114 Gene3D - 60 103 - -
Lele54g1093 114 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 64 79 IPR004827 GO:0003700|GO:0006355
Lele54g1093 114 SUPERFAMILY Leucine zipper domain 60 102 IPR046347 GO:0003700|GO:0006355
Lele54g1093 114 CDD bZIP_plant_GBF1 62 87 IPR045314 GO:0003700|GO:0006355
Lele54g1093 114 MobiDBLite consensus disorder prediction 50 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1093 Lele-ChrLele54 16856874 16857879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1093 1 87 bZIP Transcription Factor Family AT2G35530 63.265 3.54e-27 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele54g1093 bZIP_1 8.8e-10 CL0018