Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1092 ATGGATAAAACTTCAAACGACAAGGAGCCTAAGACTCCTGCTGCTTCGTCACAGGAGCAGCCTTCAACCACCAGCACTGGAGCGATAAATCCTGACTGGTCTAGCTTTCAGACATATTCTCCTATACCTCCACATGGATACTTGGCGTCAAGTCCGCAAGCCCATCCATATATGTGGGGCGTCCAGCCTATTATGCCTCCCTACGGTACTCCACCACATCCTTATGTTGCAATGTATCCCTCTGGTGGCATATATGCTCATCCATCAATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTACTTCTAACGGTATTGCTGATGCTTCAGGAAACACACCTGGCAGCATAGAAGGTGATGCTAAGCCTCCTGAGGTGAAGGAAAAATTGCCGGTAAAAAGATCAAAAGGAAGTTTGGGCAATTTGAATATGATCACGGGGAAGAATAATGAACTTAGTAAAAACCCTGGGACGTCTGCTAATGGAATTCATTCAAGAAGTGGTGAGAGTGCAAGTGAAGATACAAGTGAAGGAAGTGATGCAAATTCTCAAGATGACTCTGAATTCAAATCAGGAGGCAGGCATAATTCCTTGGAAGCTGAACCAATTCAAAATGGAAGTTCAGCCCATTCTTCTCAAAATGGGGGAGTTAATACACATCATAAGGTGGTTAATCAAGCTATGCCTATCTCTGCTGCTGGTGCTCCTATAGCTGTTCCTGGTCCCACAACAAACCTAAATATAGGAATGGATTATTGGGGAGCACCAACTTCTTCTGCAATTCCTGCAATGCACGGAAAGGTTCCTTCTACTGCAGTTGCTGGGGGAATGGTTACTGCTGGATCACGGGATAATGTTCAGTCACAACATTGGCTTCAGGATGAAAGAGAGCTTAAAAGGCAAAGACGGAAGCAGTCTAACAGAGAATCAGCTCGCAGATCCAGGTTGCGCAAGCAGGCGGAGTGTGATGAACTAGCGCAGCGTGCTGAGGCCTTGAAAGAAGAAAATGCTTCTCTCCGATCAGAAGTGAGTCGAATTCAGAGCGAGTACGAACAGTTGCTCTCAGAGAATGCTGCAATCAAGGAGAGACTGGGGGAACATCCTGAGAAAGAAGATTTGGGGTCAGGCCAAAATGATGAAAATGCAAGTGACGAAGGTCAACAAACTGGGGAGGAGGAGGCTGTGAAGGGGGATCAGTAG 1206 0.4635 MDKTSNDKEPKTPAASSQEQPSTTSTGAINPDWSSFQTYSPIPPHGYLASSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPSGGIYAHPSMPPGSYPFSPFAMPTSNGIADASGNTPGSIEGDAKPPEVKEKLPVKRSKGSLGNLNMITGKNNELSKNPGTSANGIHSRSGESASEDTSEGSDANSQDDSEFKSGGRHNSLEAEPIQNGSSAHSSQNGGVNTHHKVVNQAMPISAAGAPIAVPGPTTNLNIGMDYWGAPTSSAIPAMHGKVPSTAVAGGMVTAGSRDNVQSQHWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIQSEYEQLLSENAAIKERLGEHPEKEDLGSGQNDENASDEGQQTGEEEAVKGDQ 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1092 401 MobiDBLite consensus disorder prediction 108 220 - -
Lele54g1092 401 SMART brlzneu 297 361 IPR004827 GO:0003700|GO:0006355
Lele54g1092 401 MobiDBLite consensus disorder prediction 287 321 - -
Lele54g1092 401 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 304 319 IPR004827 GO:0003700|GO:0006355
Lele54g1092 401 SUPERFAMILY Leucine zipper domain 300 356 IPR046347 GO:0003700|GO:0006355
Lele54g1092 401 MobiDBLite consensus disorder prediction 141 180 - -
Lele54g1092 401 Pfam bZIP transcription factor 297 359 IPR004827 GO:0003700|GO:0006355
Lele54g1092 401 MobiDBLite consensus disorder prediction 10 41 - -
Lele54g1092 401 Gene3D - 300 354 - -
Lele54g1092 401 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 299 362 IPR004827 GO:0003700|GO:0006355
Lele54g1092 401 Pfam Disordered region downstream of MFMR 130 264 - -
Lele54g1092 401 CDD bZIP_plant_GBF1 302 352 IPR045314 GO:0003700|GO:0006355
Lele54g1092 401 MobiDBLite consensus disorder prediction 200 220 - -
Lele54g1092 401 MobiDBLite consensus disorder prediction 362 379 - -
Lele54g1092 401 MobiDBLite consensus disorder prediction 1 41 - -
Lele54g1092 401 Pfam G-box binding protein MFMR 3 91 IPR012900 -
Lele54g1092 401 MobiDBLite consensus disorder prediction 359 401 - -
Lele54g1092 401 MobiDBLite consensus disorder prediction 291 306 - -
Lele54g1092 401 Coils Coil 317 365 - -
Lele54g1092 401 PANTHER G-BOX-BINDING FACTOR 3-RELATED 8 390 IPR044827 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1092 Lele-ChrLele54 16848627 16852956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1092 1 397 bZIP Transcription Factor Family AT2G35530 62.162 4.25e-163 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele54g1092 MFMR_assoc 9.4e-51 No_clan