Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1091 ATGGAGGAAGAAGCAGAGCAAGAAAAAGAAGCTCTCCGTCTCAAAGCCATGGCTGAATCCAAATACAAAAGCTCCAACCTCAGCTCTGCTTTGAAATATGCCAAGCGAGCCCAACGCCTTGTTCCTGACCTCGATGGTATCTCCGAAATGGTCACTTCCTTAGACATTCTCGGTGTGGCCTCCAAATCGCCTACTCCTGACTGGTACAAGATACTCCATGTTGAGCCCTTTGCTCATCCTAACGTCATTCGGAAGCAGTACAAGAAGCTAGCTTTGACTCTTCACCCGGACAAGAATCCCCATGTGGCTTCCGAGGAGGCGTTCAAGCTCGTCAGTGAGGCGTTCCGATTTCTTTCTGATAAAATTCGGAGGAAGGAGTACGATATGAAGCTGAGGATTCGGATTCAGGATGAGGCGACAGAGGGTTCGAAGCAGCAGTTGGAGACCTTCTGGACAGCATGCTCCACCTGTCGGCTTATGCATCAATTTGAGAGGAAGTATGTGGGTCATAATTTGGTGTGCCCTAGTTGTAAAAAGAGTTTTAAGGCTGTGGAGGTTGAGGATGGTAACGAGTCTGAGGAAGAGATGAGGGTTAGGAATAGAAGTAGGAAGTTGAGAGTTGCGAGCTTGAGGAAGAAAGTTGGTACTGTTGGGAAATCACGGACCGTGAATGGGAAAGTGAGCAGTGAAGAGGTTGAACCTGTGACCACCAAGAGTGGTAGACTAAAGGATAAAGGTGGAGGCCTTGAAGTGAGAAATGGGAAATTAGAGAGTGAAGGAGCTGTTGGTAAATGGAGTGGCGGAAGACTGAGAAGTGGAGGCTTGAAGAGGAGAATGGGCACTGTTGGGGATGTGTTGGAAAGGTCCAAACCAAAGAAAATTAGAACTCGTGAGGAAACGATGACATTAGCTGAAATGCAGTCTGAAATCAAGAAAAAGGCTCAGCAAAAGAGGAAGATGACGTTGAAGCTAAAGGAGAAGGAGGGGGATAAAACAGAGAAGAGGAAAGAGCAGGGTGAATTACAAAAGGCTTTAAAAAATTCTATGAGTTTAGTGCCTGTCAAATCAAGAAGCTTGAAGAGCGGGAAGCCAGTAGTTGAGGAGAAGCAAGCATCTGTTGCTAACAGTAACTCTAGCGGAGGGGACATGGAAAATATGGCAGTGGAGGATTCAGATTTTTATGATTTTGATAAGGATAGAGTAGAGAGAAGCTTTAAGAAAGGACAGGTGTGGGCTGTATATGATGATGATGATGGAATGCCAAGGAATTATGCTTTGATTGATGAAGTATTATCAGTAAATCCTTTTGAGGTAAGAATAAGTTGGCTAGATCTACAGAACAGTGGGGATGAAAAGATAATTAGTTGGGAGAAAAGGGGGTTTCGTATATCTTGTGGGAGATTTAAAATTGCCAGGAAGACTTCCATAAATTCTGTAAACATCTTTTCCCATGTTGTAGATTGTGAACGGGCAGCTCGTGAAGTTTACATAATTTATCCAAAGAAGGGGTCTGTGTGGGCACTTTATAATGAGGCCGCTCCGGGTGTAGAGGGAAGACGTGTTGCAGTTCAGAGCAAGAGGTGCTATGATATCGTTGTATTTTTGACGAGTTATAGTGAGATAACTGGATTGAGCATGGCATATCTGGGGAAAGTCAAAGGTTACAAGACAATATTCAAGAGACAAGAAATGGGGAGTCATGCTATTAGATTTCTTGAGAGAGATGATTTCTGGTCAGTTTCACATCAAATTCCTGCACGGAAACTTTCTGGCATTGAAACTCCTGAACTTTTGAGAAACTCTTGGGAACTTGATCCTGCTTCACTTCCTTCAGATTTACTTGGGCTTAATTAG 1854 0.4396 MEEEAEQEKEALRLKAMAESKYKSSNLSSALKYAKRAQRLVPDLDGISEMVTSLDILGVASKSPTPDWYKILHVEPFAHPNVIRKQYKKLALTLHPDKNPHVASEEAFKLVSEAFRFLSDKIRRKEYDMKLRIRIQDEATEGSKQQLETFWTACSTCRLMHQFERKYVGHNLVCPSCKKSFKAVEVEDGNESEEEMRVRNRSRKLRVASLRKKVGTVGKSRTVNGKVSSEEVEPVTTKSGRLKDKGGGLEVRNGKLESEGAVGKWSGGRLRSGGLKRRMGTVGDVLERSKPKKIRTREETMTLAEMQSEIKKKAQQKRKMTLKLKEKEGDKTEKRKEQGELQKALKNSMSLVPVKSRSLKSGKPVVEEKQASVANSNSSGGDMENMAVEDSDFYDFDKDRVERSFKKGQVWAVYDDDDGMPRNYALIDEVLSVNPFEVRISWLDLQNSGDEKIISWEKRGFRISCGRFKIARKTSINSVNIFSHVVDCERAAREVYIIYPKKGSVWALYNEAAPGVEGRRVAVQSKRCYDIVVFLTSYSEITGLSMAYLGKVKGYKTIFKRQEMGSHAIRFLERDDFWSVSHQIPARKLSGIETPELLRNSWELDPASLPSDLLGLN 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1091 617 MobiDBLite consensus disorder prediction 303 384 - -
Lele54g1091 617 MobiDBLite consensus disorder prediction 303 342 - -
Lele54g1091 617 MobiDBLite consensus disorder prediction 370 384 - -
Lele54g1091 617 CDD DnaJ 67 120 IPR001623 -
Lele54g1091 617 SMART dnaj_3 66 123 IPR001623 -
Lele54g1091 617 Gene3D DnaJ domain 58 157 IPR036869 -
Lele54g1091 617 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lele54g1091 617 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lele54g1091 617 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lele54g1091 617 Pfam DnaJ domain 67 128 IPR001623 -
Lele54g1091 617 Pfam Domain of unknown function (DUF3444) 384 591 IPR024593 -
Lele54g1091 617 PANTHER BNAC03G44070D PROTEIN 5 610 - -
Lele54g1091 617 SUPERFAMILY Chaperone J-domain 63 153 IPR036869 -
Lele54g1091 617 Coils Coil 303 323 - -
Lele54g1091 617 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1091 Lele-ChrLele54 16845752 16847605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1091 1 186 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.902 4.63e-27 111