Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1071 ATGACATTGGTAAGAGAGAGGAGACACCAGGAAGCGCTAAGGCTTTCCTTACCATCACCTTCAATTCCAGAACCATATTTCTGCCATCAAACCCAAATCTCAACATCCTATAGCAATTCTCTGGCCACCAAGAACCTTTTGAGCTTTGAGAAACTCACAGTTCTCGGCCATGGCAATGGTGGTACAGTTTATAAAGTCCATAACAAGAAGAACAAAACCTTCTATGCTTTGAAAGTCCTCAGATTCAACCAGAATGCTATTGAAATCTCTCAGCAGGCTAAACGTGAAGCAGAGATTCTCAGAAGAGTGGAGTCCCCGTATATTGTGAGGTGCCATGCAGTGTTTGACAATAATTGCAGTGAATCTCATGTAAATGGAGGTGGTGGTGGTGGTGGGATTAGCTTTGTAATGGAATACATGGAAAGAGGTTCACTACATGATGTGCTGAGAGAACACAAATCACTACCAGAGGAAGTGATATCAGTGTTGGCAAAGAGAGTTTTGGAAGGACTCATCTATTTGCATGGCATGAACATAGTGCACAGAGATATCAAACCTTCAAACTTGCTTGTGAACGACAAAGGGGAAGTGAAGATTGCAGATTTTGGAGTGAGTCATGTGGTAGAAGGAAGGTTTGAGGCATCAGATTGTAATGCAGGCACGTGTGCTTATATGAGCCCAGAAAGAATTGATCCTGAGAGATGGGATGGTGAAAATGCAGATGGGTTTTCTGGGGATGTTTGGTCAGTAGGGGTTTTGATGTTAGAATGTTTTCTGGGTCATTTCCCTTTTACTGATGCAGGCCAAAAACCAGACTGGGTTACATTGATGTGTGTGATTTGTTCTGGTGAGAATCTTGAAATGCCAGAGAAGGCTTCATCTGAGTTCAAAAGCTTTGTGCAGAGATGTTTAGAGAAGGATTGGAGGAAAAGGGCAACAGTTGGTGAGCTTCTTCATCACCCTTTTGCGAAAACCAAGTCTTGCCCTTCTTCTAGCAATGTATTGCTCAATTATCTTCTGCATTGTTGA 1029 0.4257 MTLVRERRHQEALRLSLPSPSIPEPYFCHQTQISTSYSNSLATKNLLSFEKLTVLGHGNGGTVYKVHNKKNKTFYALKVLRFNQNAIEISQQAKREAEILRRVESPYIVRCHAVFDNNCSESHVNGGGGGGGISFVMEYMERGSLHDVLREHKSLPEEVISVLAKRVLEGLIYLHGMNIVHRDIKPSNLLVNDKGEVKIADFGVSHVVEGRFEASDCNAGTCAYMSPERIDPERWDGENADGFSGDVWSVGVLMLECFLGHFPFTDAGQKPDWVTLMCVICSGENLEMPEKASSEFKSFVQRCLEKDWRKRATVGELLHHPFAKTKSCPSSSNVLLNYLLHC 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1071 342 Pfam Protein kinase domain 49 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1071 342 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Lele54g1071 342 ProSiteProfiles Protein kinase domain profile. 49 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1071 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Lele54g1071 342 CDD PKc_MAPKK_plant_like 48 324 - -
Lele54g1071 342 SMART serkin_6 49 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1071 342 SUPERFAMILY Protein kinase-like (PK-like) 49 329 IPR011009 -
Lele54g1071 342 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 35 325 - -
Lele54g1071 342 Gene3D Phosphorylase Kinase; domain 1 28 137 - -
Lele54g1071 342 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Lele54g1071 342 PRINTS Tyrosine kinase catalytic domain signature 137 150 IPR001245 GO:0004672|GO:0006468
Lele54g1071 342 PRINTS Tyrosine kinase catalytic domain signature 245 267 IPR001245 GO:0004672|GO:0006468
Lele54g1071 342 Gene3D Transferase(Phosphotransferase) domain 1 138 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1071 Lele-ChrLele54 16701736 16702764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1071 1 326 MAP Kinase Kinase Gene Family AT1G32320 51.057 5.20e-110 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Lele54g1071 Pkinase 1.6e-63 CL0016