Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1062 ATGGGTGCCGGAGGTCCTGACGATGAGGACAACAGGTGGCCGCCATGGTTGAAGCCTCTGCTCAAAGAGAGCTTCTTTGTTCAATGCAAGTTACATGCTGATTCTCACAAGAGCGAATGCAATATGTATTGCTTGGATTGCATGAACGGCGCTCTCTGCTCTCTCTGCCTCGCCTTCCACAAAGACCATCGTGCCATTCAGATTAGGAGGTCTTCATACCATGATGTGATTAGGGTCTCAGAGATTCAGAAAGTTTTAGACATAAGTGGCGTGCAGACCTACATTATCAATAGCGCAAGGGTAGTGTTCCTGAACGAGAGGCCTCAGCCTAGGCCTGGCAAGGGCGTCACCAACACCTGTGAAGTCTGTGAACGTAGCCTTCTCGATTCTTACTGTTTCTGCTCTCTGGGTTGCAAGATCGTTGGGACGACGAGGGACTTCCAGAAGAAGAAGAAGCAGTCGGCCGTAATGGCGTTGGACTCGGAGGATTCGTACAGCAGCAGCAGCAGCGGCCATGGCCGGCAGATGAACGGCAAGTCTAAGGTTCAGAGCTTCACTCCGTCAACGCCGCCTCCGACTTCGGTGAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCCCACAGAGCCCCAGTGGGAGGACTAATCATACAATACTAA 660 0.5152 MGAGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLAFHKDHRAIQIRRSSYHDVIRVSEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYCFCSLGCKIVGTTRDFQKKKKQSAVMALDSEDSYSSSSSGHGRQMNGKSKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPVGGLIIQY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1062 219 Pfam PLATZ transcription factor 69 140 IPR006734 -
Lele54g1062 219 MobiDBLite consensus disorder prediction 158 206 - -
Lele54g1062 219 MobiDBLite consensus disorder prediction 159 196 - -
Lele54g1062 219 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 7 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1062 Lele-ChrLele54 16642288 16643553 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele54g1062 PLATZ 1.2e-29 No_clan