Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1051 ATGTACGTTTCCAATGTAGTCCTAAGGTTTTGGAACTCAAATGTTAGGCTCTTGATAGATAGTTTTGCTGTTCTGTCTTGTTTGTTTAATCTCAGATTCGTCTATCTGATTTATTTTCATTCTGCTTTACATCTGATTCTTTGGGACCCAACTAAGGTCACGATGGGAGATGTGGCTAAGGACCTTACTGCTGGGACTGTTGGAGGGGCAGCACAATTGATATGTGGACACCCATTTGACACCATAAAGGTCAAGCTTCAAAGCCAGCCCACACCAGCCCCTGGCCAACCTCCCAAGTATGCTGGCGCCATGGATGCAGTCAAGCAAACATTAGCAGCTGAAGGCCCAAGGGGTTTGTACAAAGGTATGGGCGCTCCACTTGCGACGGTGGCAGCTTTCAATGCTGTCCTGTTCACGGTAAGGGGACAAATGGAGGCATTGTTGAGATCGCATCCCGGTGCCCCTCTTACAGTAAACCAGCAGGTTGTTTGTGGAGCTGGTGCTGGAGTTGCTGTTTCCTTCCTTGCTTGCCCCACTGAGCTAATCAAATGCAGGCTGCAAGCACAAAGTGCACTAGCAGGTTCTGGAACAGCTACTCTGGCTGTGAAGTATGGAGGACCCATGGATGTGGCCCGGCAAGTTCTCAGGTCAGAAGGGGGTACAAAAGGTCTTTTCAAGGGCATGTTTCCGACAATGGCTCGGGAAGTACCCGGAAATGCTATAATGTTTGGTACATATGAAGCAGTAAAGCAGTTAATTGCAGGAGGCAAGGATACTTCTGGACTTGGTAGAGGTTCTTTGATAGTTGCTGGAGGCTTGGCTGGAGCTTCCTTCTGGGGTTTAGTGTACCCAACTGATGTTGTGAAGAGTGTGATTCAGGTAGATGATTACAGAAATCCCAAGTATTCTGGTTCATGGGATGCCTTTAGAAAGATTAAAGCTTCAGAGGGATTCAAAGGCCTTTACAAAGGTTTTGGTCCTGCAATGGCACGAAGTGTTCCTGCAAATGCCGCTTGCTTCTTGGCTTATGAAGTGACAAGATCAGCTCTGGGCTGA 1056 0.4773 MYVSNVVLRFWNSNVRLLIDSFAVLSCLFNLRFVYLIYFHSALHLILWDPTKVTMGDVAKDLTAGTVGGAAQLICGHPFDTIKVKLQSQPTPAPGQPPKYAGAMDAVKQTLAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEALLRSHPGAPLTVNQQVVCGAGAGVAVSFLACPTELIKCRLQAQSALAGSGTATLAVKYGGPMDVARQVLRSEGGTKGLFKGMFPTMAREVPGNAIMFGTYEAVKQLIAGGKDTSGLGRGSLIVAGGLAGASFWGLVYPTDVVKSVIQVDDYRNPKYSGSWDAFRKIKASEGFKGLYKGFGPAMARSVPANAACFLAYEVTRSALG 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1051 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 56 147 IPR018108 -
Lele54g1051 351 Pfam Mitochondrial carrier protein 268 350 IPR018108 -
Lele54g1051 351 Pfam Mitochondrial carrier protein 58 149 IPR018108 -
Lele54g1051 351 Pfam Mitochondrial carrier protein 156 254 IPR018108 -
Lele54g1051 351 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 58 350 - -
Lele54g1051 351 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 56 350 - -
Lele54g1051 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 156 252 IPR018108 -
Lele54g1051 351 ProSiteProfiles Solute carrier (Solcar) repeat profile. 262 349 IPR018108 -
Lele54g1051 351 Gene3D Mitochondrial carrier domain 53 350 IPR023395 -
Lele54g1051 351 SUPERFAMILY Mitochondrial carrier 57 344 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1051 Lele-ChrLele54 16569551 16572672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1051 76 345 Antiporters AT1G79900 35.165 7.41e-42 146