Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1041 ATGGAGAAATTGGATATCTGGATATTCAGACTTGTTCTGATATTTGTATTCGTCAGATCATCTTCTGCAAGTGAAGGATTTGTAAGCATAGCTTGCTGTGCTGATTCAGAATATACAGGTCCAGAGACAAACTTGAGTTATAAATCAGATTACACTTGGTTTGCAGATAGAACAAGCTGCATAAGCTTGAACAATCATAAGGCAAACCAAACAGACAACGAAAGAGCAAGAGTGTTTGATATTGCAGATAAGGGAAAGAGATGTTACAGCTTGCCAACAATTCAGGACAAAGTCTATATGTTAAGGGGCTCATTTCCATCTGATAATTCACTTGAAGATTTTTCCTTTAATGTGTCAATTGCAGTAACATCATTAGGTTCAGATTTACCTTCTAGTGTTCTAAAACTGGTCAGTAGAAATAATCCAGGGGGCACAGTAAGTGAGATCAGGTACCCAATAGACCCAAATGACCGAATCTGGAAAGAAACTTCAAGCTCATCAGCATCTCCCATATCATCATTCAATGTCAGCATTTCTGGCCAAATTGCTAATGTGACTCCTCCTCTTCAAGTTTTACAAACTGTTCTCACTCATTCCGAGAGATTGGAGTTCATTCACAATGTCTCAGAGACATGGAACCATGACTACCACGTGTTCCTCTACTTCCTTGAACTAAACAACATTGTTAGGTCAGGCCAAAGAGTGTTTGACATCTATCTTAATGGTGACCTTAAAGAGAAGAGTTTTGATATATTGGCTGGGGGCTCCAACTATAGACACATAATGCTGAACGTTTCATCAAATGGTGCAATCAATTTAACCTTGGCCAAAGAATCTAGTTCTGACTATGGACCACTTTGTAATGCATATGAAATTCTGGAGGAAATGCTGAAGGTGGCAGAAGAGTTGAAGATGCAAAACCAAGGCAATAAAGTGCTAGAGAGTTGGAGTGGAGACCCATGCAAGCCTTTTCCTTGGAATGGAGTAGAATGTGATCTTTTGAATGATTCAATTGTTATCAATAAGCTAGATCTGAGCTACAATGATCTCACGGGATCGCTTCAGGGATCAATTGCCTCACTGTCACATCTAACATCCTTATATTTCGGCTGCAATCCTGACATGAGCAAGGAGGTCCCATCAAACTTCAACAGCTCACTTGATACCGATAAAGACGATTTCTTTGTGAAGTCAGTGTGTATTCAAAAGTTTACCCTGGATTATATAGAGGCAGCCACCCGGTGGTACAAAACATTAATAGGTGAAGGAGGATTTGGCTGTGTTTACAGGGGCATTCTAGAAGATTGTCAAGAAGTGGCCATGAAAGTCCGGTCAGCCACATCAACTCAGGGAACTAAGGAATTTGACAATGAGGTATCAAAATTCCCATGCTTACATGATACTAAATCTGCTTTCCGAGGAGAAGCAGCAAAGAGAAAAGTATTAGACTGGCCAACCAGACTTTCAATTGCTCTGGGTGCAGCTCGAGGAGACATCGGTGCTTCTCTTGAACTAAGAGGAACAGCAGGATATCTGGATCCCGAGTACTATTCCACACAGCAGTTATCTGCCAAAAGTGATGTCTTCAGCTTTGGTGTGGTTCTACTCGAAATCGTGAGTGGTCGGGAACCTCTCAACATCCACAGGCCACGCAATGAGTGGAGTCTAGTGGAATGGGCACAGCCATATATAAGAGCAGCAAATATTGATGAAGTAGTGGATCCTGGGATAAGAGGAGGATATCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACACTCATGTGTTGAGAGCTTGTCAAGATTCAGACCTGAGATGGAGGATTCGACTTTATTGGAAGCACAAGTTGTTGAATTGAATAATCAAATACTTGACATTTCAAAGGAAGAGAAAAATTGGATCGTACTAGTTCATAGGTATAATAAAGCGGTTGCTAATTGCTATGAATGCAGGGTGCAATATGAACAAATTTACTTGGAACATTAA 1989 0.4093 MEKLDIWIFRLVLIFVFVRSSSASEGFVSIACCADSEYTGPETNLSYKSDYTWFADRTSCISLNNHKANQTDNERARVFDIADKGKRCYSLPTIQDKVYMLRGSFPSDNSLEDFSFNVSIAVTSLGSDLPSSVLKLVSRNNPGGTVSEIRYPIDPNDRIWKETSSSSASPISSFNVSISGQIANVTPPLQVLQTVLTHSERLEFIHNVSETWNHDYHVFLYFLELNNIVRSGQRVFDIYLNGDLKEKSFDILAGGSNYRHIMLNVSSNGAINLTLAKESSSDYGPLCNAYEILEEMLKVAEELKMQNQGNKVLESWSGDPCKPFPWNGVECDLLNDSIVINKLDLSYNDLTGSLQGSIASLSHLTSLYFGCNPDMSKEVPSNFNSSLDTDKDDFFVKSVCIQKFTLDYIEAATRWYKTLIGEGGFGCVYRGILEDCQEVAMKVRSATSTQGTKEFDNEVSKFPCLHDTKSAFRGEAAKRKVLDWPTRLSIALGAARGDIGASLELRGTAGYLDPEYYSTQQLSAKSDVFSFGVVLLEIVSGREPLNIHRPRNEWSLVEWAQPYIRAANIDEVVDPGIRGGYHAEAMWRVVEVAHSCVESLSRFRPEMEDSTLLEAQVVELNNQILDISKEEKNWIVLVHRYNKAVANCYECRVQYEQIYLEH 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1041 662 Gene3D - 135 295 - -
Lele54g1041 662 Pfam Protein tyrosine and serine/threonine kinase 510 608 IPR001245 GO:0004672|GO:0006468
Lele54g1041 662 SMART serkin_6 416 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1041 662 Pfam Leucine rich repeat N-terminal domain 308 332 IPR013210 -
Lele54g1041 662 Gene3D Phosphorylase Kinase; domain 1 397 469 - -
Lele54g1041 662 Gene3D Transferase(Phosphotransferase) domain 1 499 634 - -
Lele54g1041 662 PANTHER OS07G0107800 PROTEIN-RELATED 402 610 - -
Lele54g1041 662 SUPERFAMILY L domain-like 312 384 - -
Lele54g1041 662 Pfam Malectin-like domain 131 292 IPR024788 -
Lele54g1041 662 Pfam Malectin-like domain 34 110 IPR024788 -
Lele54g1041 662 Gene3D Ribonuclease Inhibitor 296 389 IPR032675 -
Lele54g1041 662 SUPERFAMILY Protein kinase-like (PK-like) 397 609 IPR011009 -
Lele54g1041 662 ProSitePatterns Protein kinases ATP-binding region signature. 420 442 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1041 Lele-ChrLele54 16491159 16497233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1041 21 607 Receptor kinase-like Gene Family AT2G14510 23.961 9.91e-43 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele54g1041 Malectin_like 2.9e-24 CL0202