Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1033 ATGGCATCCTCCTCCGCTTCCGTCTTCTTTCTGTTGATCTTCATGTTGACCTTGTCTTTCCAACCCACTGTAGACTCAGTTTTCTTTGACTTCGCTAAATTCCAACCGAACATGAACCTAATACACTTCCAAGGTGATGCGTTTTCGTCGGATGATGTTCTTCAGCTCACGAAGAACCGGCTCGATGGCCCCATCACCAGCAGTGTTGGTCGAGCCTCGTATGCTGAACCGGTTCGTGTTTGGGATAGAACAACAGGGAAGCTCACAGACCTCACCACTCATTTTACCTTTATCATGAAAGCCGTTGATAACACACAATTCGGTGATGGCATATCCTTCTTCCTTTCGCCTTTCCAATCTGAAATCCCGAACAATTCATTTGGTGGGTACCTTGGCCTCTTCAGTCCAGAATCTGCATTCACTAATACCAATAATTCCATAGTTGCGGTTGAGTTCGACAGCTTTAACAACGCGTGGGATCCAACCTCGGACCATGTCGGAATCAATGTGAATTCCATCGTATCAGTCGCGAATGTTTCCTGGAAGAGCAGCATGAAGCAAGGGAAAACAGCTAATGTTTGGATAGAATATAATTCTACCACAAAAAATCTGAGCGTGTTCCTTACTTATGCTGATAATCCAGTTTATATGGGTAATTCTAGCGTTTGGCATATCATTGATTTGAAGGAAGTTTTGCCAGAATGGGTACGTGTTGGATTTTCTGCTTCTACAGGTCATTGGGTTGAATTACACAAAATCGTCTCTTGGTCATTCAATTCAAGCTTGGAAAGTGATATCAATGTTGGGAATAACAAGAAAGTTGTTTTGGGGGTTGGTTTAAGTGTCGGTTTTGGTTCTCTTATCTGTGTTGCTGGACTGTTATGGTTCACCATTTGGAGAAAGAAACATTTCAGGAAGAAGGAAGAAGGAGGTAAAGGCTTTGAAGCTTCCATGGATGATGAATTCGAGAAAGGAACAGGACCAAAGAGATTCACCTACCAGGAGCTAAATCATGCAACAAATGATTTTTCTGAGACAGGAAAGCTAGGAGAAGGAGGATTTGGAGGTGTTTACAAAGGTTTTCTCACAAACGAAAATCTAAAAGTAGCTGTGAAGAGAGTTTCAAAAGGATCAAAACAGGGGAAAAAGGAATACATATCAGAAGTGAGAATCATCAGCAGGTTGAGACACAGAAACCTAGTCCAACTCATTGGGTGGTGCCATGAACAAGGTGAGTTCCTTCTTGTTTATGAATTCATGCCTAATGGAAGTCTTGACTCCCACCTATTTGGAAACAAAACCCCACTTACTTGGACAGTAAGGTACAAAGTAGCCCTGGGTTTGGCCGCTTCTCTGCTGTATCTTCATGAAGAATGGGAACAATGCGTAGTTCACAGAGATATCAAGTCAAGTAATGTCATGTTAGACGCAAACTTCAACGCAAAACTAGGTGATTTTGGTCTTGCAAGGCTAGTTGACCATGAACTTGGGTCTCAAACCACAGTTCTAGCAGGCACAATGGGGTACTTAGCCCCAGAATGTGTAACCACAGGAAAAGCAAGTAAGGAATCTGATGTTTACAGTTTTGGGGTGGTAGCCCTAGAGATTTCGTGTGGAAGGAGACCAGTTGAAGTAAGAGCTGATGAACCTGGCAAGGTAAGAATGGTGGAGGGGGTGTGGGACCTATATGGAAAAGGGAAGGTTCTAGAAGCTGCTGATAAGAAACTAGATTTGGAATATGATGAGAGTCAAATGGAGTGCTTGATGATTGTAGGGTTATGGTGTTGCCATCCAGATCAGAAGATGAGGCCTTCCATAAGGCAAGTCATAAAAGAGCTCAATTTTGAAGCTGCTTTTCCAAGTCTTCCTTCAAAGCTTCCCGTTCCTATGTATTATGCTCCTCCCATGGAAATGTGCAGATTCTCATATACATCGTCTGGGCCCACTGCATCAATCAACTCATCATCAGTATCAGGAGGATCCAGAAAGTCCCTCTTGTCAGCTCAATGA 2010 0.4308 MASSSASVFFLLIFMLTLSFQPTVDSVFFDFAKFQPNMNLIHFQGDAFSSDDVLQLTKNRLDGPITSSVGRASYAEPVRVWDRTTGKLTDLTTHFTFIMKAVDNTQFGDGISFFLSPFQSEIPNNSFGGYLGLFSPESAFTNTNNSIVAVEFDSFNNAWDPTSDHVGINVNSIVSVANVSWKSSMKQGKTANVWIEYNSTTKNLSVFLTYADNPVYMGNSSVWHIIDLKEVLPEWVRVGFSASTGHWVELHKIVSWSFNSSLESDINVGNNKKVVLGVGLSVGFGSLICVAGLLWFTIWRKKHFRKKEEGGKGFEASMDDEFEKGTGPKRFTYQELNHATNDFSETGKLGEGGFGGVYKGFLTNENLKVAVKRVSKGSKQGKKEYISEVRIISRLRHRNLVQLIGWCHEQGEFLLVYEFMPNGSLDSHLFGNKTPLTWTVRYKVALGLAASLLYLHEEWEQCVVHRDIKSSNVMLDANFNAKLGDFGLARLVDHELGSQTTVLAGTMGYLAPECVTTGKASKESDVYSFGVVALEISCGRRPVEVRADEPGKVRMVEGVWDLYGKGKVLEAADKKLDLEYDESQMECLMIVGLWCCHPDQKMRPSIRQVIKELNFEAAFPSLPSKLPVPMYYAPPMEMCRFSYTSSGPTASINSSSVSGGSRKSLLSAQ 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1033 669 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Lele54g1033 669 Pfam Protein kinase domain 344 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1033 669 CDD STKc_IRAK 357 614 - -
Lele54g1033 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Lele54g1033 669 Gene3D - 24 275 - -
Lele54g1033 669 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Lele54g1033 669 PANTHER - 49 623 - -
Lele54g1033 669 ProSitePatterns Legume lectins alpha-chain signature. 232 241 IPR000985 -
Lele54g1033 669 FunFam L-type lectin-domain containing receptor kinase IX.1 25 271 - -
Lele54g1033 669 SUPERFAMILY Protein kinase-like (PK-like) 327 643 IPR011009 -
Lele54g1033 669 ProSiteProfiles Protein kinase domain profile. 343 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1033 669 Gene3D Transferase(Phosphotransferase) domain 1 420 634 - -
Lele54g1033 669 CDD lectin_legume_LecRK_Arcelin_ConA 29 262 IPR001220 GO:0030246
Lele54g1033 669 FunFam L-type lectin-domain containing receptor kinase IX.1 328 419 - -
Lele54g1033 669 SMART serkin_6 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g1033 669 Pfam Legume lectin domain 29 264 IPR001220 GO:0030246
Lele54g1033 669 ProSitePatterns Legume lectins beta-chain signature. 148 154 IPR019825 -
Lele54g1033 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 263 IPR013320 -
Lele54g1033 669 FunFam Lectin-domain containing receptor kinase A4.3 420 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1033 Lele-ChrLele54 16457353 16459362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1033 6 632 Receptor kinase-like Gene Family AT5G10530 51.174 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele54g1033 Pkinase 5.7e-51 CL0016