Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g1014 ATGCTCATGTTTCTAGTGTTATTACATTGTCTTGTGGGTTACTGTTATATTGAAGTGTCCCATAAAGTTATGAAGACATTGTTGTCAAATTTCCTGAAGCAGGATTGCTGGAGAACTCAACTCTGTTGCAATATCAATAGGCCAATACATACCTTATTTTGCAAATCCCATGTTTTTAAGTGCCATTCTTTTCTAGGACCAGGCCCACCAAGTGAGCTACCTATTTCTAAGGTGGCAGCCACAGCACTGGCAAGGTCTTATAATCTATTACAATGTTGTCCTGTCACAGCAAAGTTGATTCCAGCCATTGGCATTATTATTTTTGCAGTATGGGGTGTTGGCCCATTAATGTATTACACAATAAAACTGCTTCTCCAGAGGAGCGACAATAGTTGGAAGAAAAGTAAGACACATTATGTAGTAACTTCTTACATTCAGCCATTACTGTTATGGACTGGAGCTATGCTTATTTGCAGAGCCTTAGACCCATTAAGTTTACCTTCAGAAGCAGCTCATGCTGTCAAGGAACGGCTTCTGAGTTTTGTAAGATCATTGTCAACTGTACTTGCCTTTGCCTATTGTTTATCACGTGTGATTCAACAAGCACAGAAATTCTTCATGGAGAGTGCTGCTGATACCTGTGAGACAAGAAATATGGGATTCCATTTTGCAGGCAAAGCTGTTTATTTTGCAGTATGGATTGCTGCCTTCTCTTTGTTCATGGAGTTGCTGGGCTTTTCTACTCAGAGGTGGGTTACCGCAGGAGGTCTTGGGACTGTTTTGTTTACTCTTGCTGGTCGGGAGATATTTACAAACTTCCTTTCAAGTGCAATAATTCATGCAACTCGGCCTTTTGTGGTGAATGAATGGATTCAAACAAAGGTCGAAGGATATGAAGTTTCTGGTCCTGTGGAGCATGTTGGCTGGTGGTCAGCAACAATTATACGCGGCGAAAATCATGAAGCTCTTTACATTCCAAACCACAAGTTCACAATGAACGTTGTGCGAAACCTCAGTCAGAAAACACATTGGCGCTTCAAGACCCACCTGACTATTAGCCATATGGATGTTAATAAGATAAATAACATTATTGCTGACATGAGAAAAGTCTTGGCCAAAAATCCTCAAGTTGAGCTGCAAAGGCTGCACAGGAGAGTGTTTCTGGAGAATATAGATCCTGAAAATCAGGCTCTTTTGATATTGGTGTCCTGCTTTGTCAAGACCTCACACCAGGAAGAATTTTTGTGCGTTAAATGGTACTGGAACAGTACCAAAGAATCCAATAATAATAGAACCACCATACAAGATCAAAGCAATGATACGACAAAAAGTCATAACAAGACAGCCACGCAAACCAAGGTTGGACCAACAGTTTCAGATTTTAAGGTCAGAGAAACTCATTCTGACTCCAAGGCAGATGTTGAAGCTGTGATATCTAATTCTGCTGCAAACGGAAACTTGAAGGTTGCCGTTACATCATCCAAACCCAATCATGAAGTGGGTAAACATGAGACAATGAAAATGGAGTCAAATAGTATGTCTGCTTCTGACTCCAAATTTAGTGAAGCTGCTGTAAATAACATGACCGAGAAGAATTCTGATGTCGTACAATCTAAGAATGCTGTCAAAGGAGGTGGACGTCCAAAGAATATGCAGACAAAACAGAAAGATGAAAGGAAACAAGTTGGACAACCTCAAATATCTAGGCCTGTCCTTGAAGATAATATAGTACTTGGCGTAGCATTGGAGGGATCAAAGAGAACGCTTCCTATTGACGAGGGAATGGATTCATCTTCTGCTCGAGAGGCAAAAGAAATGGCTGCCCAGGGTAGAAATAGATCCCTGACAGCTGAGAATGGGGAAGGTAAGTAA 1872 0.4097 MLMFLVLLHCLVGYCYIEVSHKVMKTLLSNFLKQDCWRTQLCCNINRPIHTLFCKSHVFKCHSFLGPGPPSELPISKVAATALARSYNLLQCCPVTAKLIPAIGIIIFAVWGVGPLMYYTIKLLLQRSDNSWKKSKTHYVVTSYIQPLLLWTGAMLICRALDPLSLPSEAAHAVKERLLSFVRSLSTVLAFAYCLSRVIQQAQKFFMESAADTCETRNMGFHFAGKAVYFAVWIAAFSLFMELLGFSTQRWVTAGGLGTVLFTLAGREIFTNFLSSAIIHATRPFVVNEWIQTKVEGYEVSGPVEHVGWWSATIIRGENHEALYIPNHKFTMNVVRNLSQKTHWRFKTHLTISHMDVNKINNIIADMRKVLAKNPQVELQRLHRRVFLENIDPENQALLILVSCFVKTSHQEEFLCVKWYWNSTKESNNNRTTIQDQSNDTTKSHNKTATQTKVGPTVSDFKVRETHSDSKADVEAVISNSAANGNLKVAVTSSKPNHEVGKHETMKMESNSMSASDSKFSEAAVNNMTEKNSDVVQSKNAVKGGGRPKNMQTKQKDERKQVGQPQISRPVLEDNIVLGVALEGSKRTLPIDEGMDSSSAREAKEMAAQGRNRSLTAENGEGK 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g1014 623 MobiDBLite consensus disorder prediction 584 623 - -
Lele54g1014 623 Pfam Mechanosensitive ion channel 226 420 IPR006685 GO:0016020|GO:0055085
Lele54g1014 623 Gene3D - 181 283 - -
Lele54g1014 623 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 23 418 IPR045042 -
Lele54g1014 623 SUPERFAMILY Sm-like ribonucleoproteins 269 339 IPR010920 -
Lele54g1014 623 MobiDBLite consensus disorder prediction 427 452 - -
Lele54g1014 623 MobiDBLite consensus disorder prediction 529 568 - -
Lele54g1014 623 MobiDBLite consensus disorder prediction 494 515 - -
Lele54g1014 623 Gene3D - 285 340 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g1014 Lele-ChrLele54 16320736 16324492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g1014 21 618 Mechanosensitive Ion Channel Family AT5G10490 49.531 0.0 572