Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0992 ATGGTTGCAGTCGCGCCTAACTCCACGATCAAATTCCTATGCAGCTACGGCGGCAAAATCGTCCCTCGCTATCCCGACGGCAAGCTCCGTTATCTCGGCGGCCACACCCGTGTTCTTTCCGTCCCCTGCTCCATTTCTTTCTCTGAGCTGTTGTTGAAGATGGGAGAGTTGTGTGGCTCACCTGTTAGCCTCCGTTGTCAATTGCCCGCGGAAGATCTTGATGTTCTCGTTTCTATCACCTCAGACGAAGATCTAGTTAACCTCATCGAGGAATATGATCGTGTTGCGTCGCCTTCCTCTGCTTTAAAGATCAGAGCCTTCCTTTCTCCGCCAAAATCGTTGAACAAGGTTTCTTCCTCTTCCTCCTCGTCGCCGTCCTCGTCGTTGTCTTTGTCCAAATCATCCTCATCCACGTCGTCTTTGTCGTCGTCTGCTTCATCTCGCAGTCTTACTTCTGCTTGTGGTTGCTCCGCTCTTGGTTCAAACCGGAAGTATCCCGTTTTGCCGGCCACGGCCGACCGGATCTCACGCTCCATGTCAGCGCCGATGGCCTATCCAATTTGCATAGGAAAGTCTTCTGGGACGAATATTCCGCTCCCTCACTGTGCTTACCATGCTCGGAGAAACTCTGGTCACATTTACCTTATCCACAACGGGAACCATTGGCAACAGTGCTGA 678 0.5192 MVAVAPNSTIKFLCSYGGKIVPRYPDGKLRYLGGHTRVLSVPCSISFSELLLKMGELCGSPVSLRCQLPAEDLDVLVSITSDEDLVNLIEEYDRVASPSSALKIRAFLSPPKSLNKVSSSSSSSPSSSLSLSKSSSSTSSLSSSASSRSLTSACGCSALGSNRKYPVLPATADRISRSMSAPMAYPICIGKSSGTNIPLPHCAYHARRNSGHIYLIHNGNHWQQC 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0992 225 Gene3D - 28 108 - -
Lele54g0992 225 PANTHER OS05G0427100 PROTEIN-RELATED 6 154 - -
Lele54g0992 225 SMART PB1_new 24 109 IPR000270 GO:0005515
Lele54g0992 225 SUPERFAMILY CAD & PB1 domains 26 118 - -
Lele54g0992 225 Pfam PB1 domain 26 108 IPR000270 GO:0005515
Lele54g0992 225 CDD PB1_UP2 13 108 - -
Lele54g0992 225 MobiDBLite consensus disorder prediction 112 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0992 Lele-ChrLele54 16147983 16148753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0992 10 108 MAP Kinase Kinase Kinase AT3G46920 50.495 5.68e-29 112