Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0986 ATGGCTCTGCTTCTAGGCGGAATTCAACCTCAGATACTAACTTCCTTTCGTCATGATCATAGAAAAACTTGTATCAGAGTTTGTAGTAGACGCTTCCATTTCGCCGTTAATACTAGAGTTCACACTGTTCTGTATCAGAGACGCATACTTGTGAGCCCCCCAAAATCCGCGTCCATAGATGGGTTTTCTGTCCAGAAGAATCCAGAAGCTTTAAGTGAAGAAAAAGAGGAAGATGAAGTGTTTCTGAAGAGGCTAAGAAGATGGTTCAGTTTCCTTCCTTCGATTTTGCCTGGAGGAAGCTGGTGGAACTTCTCCGAAAACGTCGAATTTCAAGATTCAGCTAAACCCGTAACTGTGTGGCGCGCACTTGCCAAAATGTGGCAACTTGTTGCTCAAGACCGATGGATTATTTTAGCTGCATTCACTGCTCTGATTCTTGCGGCGGTTTCGGAGATTTCCATACCGCATCTCTTAACAGCATCTATCTTCTCCGCACAGGGTGCGGATGTTACCGTTTTCCGTCGGAATGTGCTTTTCTTGGTTCTGTTCTGTATAACTTCGGGAATATGCAGTGGGATACGAGGCGGCTGTTTTGGTATTGCAAATATGATACTGGTAAAGAGAATGAGAGAAACATTATACTCCTCCCTTCTTCTTCAGGATATATCATTTTTTGACAATGTAACAGTTGGTGATCTGACAAGTAGGCTTGGTGCTGATTGCCAACAAGTTTCTCGTGTAATTGGAAATGATCTTAACCTGATACTGCGCAATGTTCTTCAGGGAACAGGTGCATTAACCTACTTGTTATTTTTGTCTTGGCCACTTGGTTTATTTACCTTGATGATATGCTCTATATTAGCAGCAGTTTTGCTACTTTATGGAAGGTACCAGAAAAAGGCTGCAAAGTTGATCCAAGAAGTCACTGCTTCTGCTAATGAAGTTGCACAAGAGACATTTTCTCTGATTAGAACTGTCCGTGTTTATGGAACAGAAGAAGAAGAACTTGGAAGGTACAAATGGTGGCTGGGAAAGTTAGCTGATATAAGCTTGAGACAAAGTGCTGCGTATGGATTTTGGAATTTCAGCTTCAATAATCTTTATCATTCAACTCAGGTTATCGCCGTGCTGTTTGGAGGAATGTCTATTCTAGCAGGTCATATTACAGCAGAGAAACTTACTAAGTTTATACTATACAGTGAATGGCTTATTTATTCAACCTGGTGGGTGGGAGACAGTATATCATCTTTGATGCAATCTGTTGGGGCTAGTGAAAAAGTATTCCAATTGATGGATCTCTCACCTAGCACCCAGTTCCATGCAAAAGGAGTAAAGCTGCAGAGGTTAATTGGGAATATTGAATTTACAAACGTATCTTTTCATTATCCTTCAAGGCCAATGGTATCTGTAGTGCAGCATATAAATTTTGCTGTTCGACCTGGTGAGGTGGTTGCAATAGCTGGTCTCAGTGGCAGTGGAAAAAGTACACTGGTGAACCTTCTGCTCCGCCTATATGAGCCAACCGATGGTCAGATTTTGGTTGATGGCGTCCCTCTTAAAGAGCTGGACATCACGTGGTGGAGAGAAAGAATTGGATTTGTTGGACAGGAACCTAAGCTCTTCAGAATGGATATTAGTTCAAACATAAGATATGGATGCACTGGAGAGATTACGCAAGAGGATGTTGAATGGGCTGCAAAGCAAGCTTATGCCCATGACTTCATCTCAGCACTTCCTAATGGCTACGAAACACTTGTTGATGATGATTTGTTAAGTGGGGGACAAAAGCAGCGAATTGCTATTGCTAGAGCTATTCTCAGGGATCCAAAAATATTGATCCTTGATGAAGCTACAAGTGCACTGGATGCTGAGAGTGAACATAACGTCAAGGGTGTTCTTCGTTCTGTTAGAAATGACTCCCTGAGTATCAGAAGTGTTATTGTAATTGCGCACAGGCTTTCTACCATACAAGCAGCAGACAGGATTGTGGTAATGGATAGTGGTAAAATTGTTGAGGTTGGGAGTCACAGTGAGCTTCTTTTAAGAGATGGTTTGTATGCACGATTGACCAGTAAACAGGCTGACGCAGTGGCATGA 2097 0.422 MALLLGGIQPQILTSFRHDHRKTCIRVCSRRFHFAVNTRVHTVLYQRRILVSPPKSASIDGFSVQKNPEALSEEKEEDEVFLKRLRRWFSFLPSILPGGSWWNFSENVEFQDSAKPVTVWRALAKMWQLVAQDRWIILAAFTALILAAVSEISIPHLLTASIFSAQGADVTVFRRNVLFLVLFCITSGICSGIRGGCFGIANMILVKRMRETLYSSLLLQDISFFDNVTVGDLTSRLGADCQQVSRVIGNDLNLILRNVLQGTGALTYLLFLSWPLGLFTLMICSILAAVLLLYGRYQKKAAKLIQEVTASANEVAQETFSLIRTVRVYGTEEEELGRYKWWLGKLADISLRQSAAYGFWNFSFNNLYHSTQVIAVLFGGMSILAGHITAEKLTKFILYSEWLIYSTWWVGDSISSLMQSVGASEKVFQLMDLSPSTQFHAKGVKLQRLIGNIEFTNVSFHYPSRPMVSVVQHINFAVRPGEVVAIAGLSGSGKSTLVNLLLRLYEPTDGQILVDGVPLKELDITWWRERIGFVGQEPKLFRMDISSNIRYGCTGEITQEDVEWAAKQAYAHDFISALPNGYETLVDDDLLSGGQKQRIAIARAILRDPKILILDEATSALDAESEHNVKGVLRSVRNDSLSIRSVIVIAHRLSTIQAADRIVVMDSGKIVEVGSHSELLLRDGLYARLTSKQADAVA 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0986 698 FunFam Multidrug ABC transporter ATP-binding protein 445 697 - -
Lele54g0986 698 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 453 692 IPR003439 GO:0005524
Lele54g0986 698 Gene3D - 443 697 IPR027417 -
Lele54g0986 698 Pfam ABC transporter transmembrane region 139 404 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele54g0986 698 Pfam ABC transporter 472 619 IPR003439 GO:0005524
Lele54g0986 698 SMART AAA_5 480 669 IPR003593 -
Lele54g0986 698 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 444 693 IPR027417 -
Lele54g0986 698 CDD ABC_6TM_TAP 140 427 - -
Lele54g0986 698 FunFam ABC transporter B family member 26, chloroplastic 119 438 - -
Lele54g0986 698 Gene3D ABC transporter type 1, transmembrane domain 120 440 IPR036640 GO:0005524|GO:0016020
Lele54g0986 698 PIRSF ABC_prm/ATPase_B 14 698 - -
Lele54g0986 698 PANTHER ABC TRANSPORTER B FAMILY 120 689 - -
Lele54g0986 698 SUPERFAMILY ABC transporter transmembrane region 125 433 IPR036640 GO:0005524|GO:0016020
Lele54g0986 698 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 138 419 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele54g0986 698 ProSitePatterns ABC transporters family signature. 591 605 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0986 Lele-ChrLele54 16114721 16119976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0986 208 696 Calmodulin-binding Proteins AT2G36910 34.068 2.65e-71 250