Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0978 ATGAATGAAGTTTTAGCTAATAGGCCTTCATTCATCGACGTCGGTTGCGTGTTATATGTTCCTAAGGAACTCAATGGGATTCCATCTTCAAAAGGAAGTGGAACTTCTGATGTTAATGCTTTTCATTCTGTTTTTGTTTTTCCCTCCTTGTTACCAGGAAAGAAACGCAAGCTTTCTATTATCGTTGGTGTCTTAGTGGGTGTGGCATTACTTTCTGTTATCACAATAACCATTCTAATTCTGTGGAGGAAAAGAGCCACTGAAACCATCAAAGAAGATACAAAAGGCGTATCGAAAAGATCAAAAGTAACATGGATTGACTCAGAAAGACCAGTAACATTCTATCTCGAGGAGATAGAGGAGGCCATAAACAAAGAAAGCAAAATAATAGGAAAGGGAGGGTATGCAACTGTGTATTTTGGAATTTTAGGAGAAAAGGAGGTTGCTATAAAAGAGATGAGGTCTAATAAATCCAAAGAGTTCTATGCAGAACTGAAGGTCTTATGCAGGATCCATCACATCAACATTGTGGAGCTATTGGGATATGCCAGTGGAGAAGGCATCCTCTATTTGGTGTATGAAGCACAGATTGCTCTGGATGCTGCAAAGGGTCTTGAATACATACACGACTACACTAAAGCATGGCATGTGCACCGAGATATCAAGACTAGCAATATTCTTCTGGACAATAAACTCAGAGCCAAGATTGCAGATTTTGGACTAGTAAAGCTGTTAGAACGAATGAATGATGATGATTTTATAGCAACAAGGCTTGTTGGAACACCAGGCTACCTTCCACCAGAATCTGTGAAGGAGCTTCAGATTAATAAAGTATTTGAAGCCGATGATCCAGAGTGCGCTTTAGAGGATATTATAGACAAAAACCTTCGAGATAACTATCCTGTGGAGGATGTCTTCAAGATTGTGGTGATATTGTCAGGTTTTGATGTCATCCACAAAGTGGGAAGCATCTCTAGGTGGAAACATGAAGTCTTTAGCGGCATATTTACTGGAAGATGA 1020 0.3961 MNEVLANRPSFIDVGCVLYVPKELNGIPSSKGSGTSDVNAFHSVFVFPSLLPGKKRKLSIIVGVLVGVALLSVITITILILWRKRATETIKEDTKGVSKRSKVTWIDSERPVTFYLEEIEEAINKESKIIGKGGYATVYFGILGEKEVAIKEMRSNKSKEFYAELKVLCRIHHINIVELLGYASGEGILYLVYEAQIALDAAKGLEYIHDYTKAWHVHRDIKTSNILLDNKLRAKIADFGLVKLLERMNDDDFIATRLVGTPGYLPPESVKELQINKVFEADDPECALEDIIDKNLRDNYPVEDVFKIVVILSGFDVIHKVGSISRWKHEVFSGIFTGR 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0978 339 Gene3D Transferase(Phosphotransferase) domain 1 192 283 - -
Lele54g0978 339 ProSiteProfiles Protein kinase domain profile. 124 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0978 339 Gene3D Phosphorylase Kinase; domain 1 97 191 - -
Lele54g0978 339 SMART serkin_6 124 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0978 339 Pfam Protein tyrosine and serine/threonine kinase 127 194 IPR001245 GO:0004672|GO:0006468
Lele54g0978 339 ProSitePatterns Protein kinases ATP-binding region signature. 130 151 IPR017441 GO:0005524
Lele54g0978 339 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 9 194 IPR044812 GO:0019199|GO:0045087
Lele54g0978 339 SUPERFAMILY Protein kinase-like (PK-like) 109 273 IPR011009 -
Lele54g0978 339 Pfam Protein kinase domain 197 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0978 Lele-ChrLele54 16068878 16071360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0978 109 272 Receptor kinase-like Gene Family AT1G51940 48.187 1.48e-52 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele54g0978 Pkinase 3e-17 CL0016