Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0965 ATGGAAACTACTGGTTCGGTTTTCACGCTTCTGGGTTTGCTGCTTCTGGCGTTGATGGAGATTTCTTCTGCCGCGCTTTCTCCTTCTGGGATAAATTATGAAGTTGTCGCTCTGATGGCCATAAAAAATGAATTACATGATCCCCACAATGTCCTGGAGAGTTGGGATATTAATTCTGTCGATCCTTGTAGCTGGAGGATGATTACTTGTACCCGGGATGGCTCCGTCTCTGCTTTAGGATTGCCTAGTCAGAACTTGTCTGGTAAGCTATCTCCTGGGATTGGAAATCTGACCAACTTGCAATCTGTGTTACTTCAGAACAATGCCATTTCTGGTTCAATTCCCGCTGATATAGGAAAGCTGGAAAAACTTCAGACACTTGATCTTTCCAATAATACATTTAGCGGAGAGATACCTAGTTCTCTGGGGAGCCTCAATAATCTGCATTATCTGATTGTGGGAAACTCTTTGATTTGTGGTCCAAATGCTAAGAATAACTGCTCTAATGTTCTGCCGGAGCCACTTTCATTCCCGCCAGATTCTTTAAGAGGCCAATCAGCATCTGGGACAAGAAGTCATCATGTTGCAGTTGCTTTCGGAGCAAGTTTTGGGGCTGCTTTTGTCATCGTCATTATTTCCGTGTTTATTGTTTGGTTGCGTTATAGACATAACAAACAGATATTCTTTGATGTTAATGAGCAATATGACTCAGAGGTGTGCCTTGGCCATTTGAGAAGGTATACATTCAAAGAACTTCGAGCTGCAACAGATCATTTCAATTCAAAGAACATTCTTGGACGGGGTGGCTTTGGAATCGTCTACAAAGGGAGTTTCAATGATGGCTCTGTGGTGCTTCTTGGCTTGGAAGACACTTCCTTGTGGCGCACTTATCCCTTGTTACTAGACCAAGATGGTCAATTATTATCTGATATAGTGCTACATCAACTTCATGGCCGACCCGCTTTAGATTGGCTTCTGGATCACAGAGACACTCATGTAACTACTGCTGTGCGGGGCACTGTTGGTCACATTGCTCCTGAATATTTATCTACAGGCCAGTCATCAGAAAAGACTGATGTGTTTGGTTTTGGGATCTTACTGCTCGAGCTGATCACAGGTCATAAGGCTTTGGATTTTGGACGAGCAGCAAACCAGAAAGGTGTAATGCTTGATTGGGTGAAGAAGCTCCATCAAGAAGGAATATTAAGTCAAATGGTTGACAAGGATTTGAAGGGAAACTTCGATGCAAATGAACTGGAGGAAATGGTTCAGGTTGCACTGTTATGTACACAATTTAATGCTCTGCACAGACCTAAGATGTCAGAAGTTTTGAAGATGTTGGAGGGAGATGGCTTGGCTGAGAGGTGGGAGGAAGCTTCACAGACAACAGAGACAAGGTTCAGGTCTTTTGAAAACCCTCCTCAAAGGTACTCAGATTTTATAGAAGAATCTTCATTCATTCTTGAAGCTATGGAGCTTTCTGGCCCTAGGTGA 1494 0.4317 METTGSVFTLLGLLLLALMEISSAALSPSGINYEVVALMAIKNELHDPHNVLESWDINSVDPCSWRMITCTRDGSVSALGLPSQNLSGKLSPGIGNLTNLQSVLLQNNAISGSIPADIGKLEKLQTLDLSNNTFSGEIPSSLGSLNNLHYLIVGNSLICGPNAKNNCSNVLPEPLSFPPDSLRGQSASGTRSHHVAVAFGASFGAAFVIVIISVFIVWLRYRHNKQIFFDVNEQYDSEVCLGHLRRYTFKELRAATDHFNSKNILGRGGFGIVYKGSFNDGSVVLLGLEDTSLWRTYPLLLDQDGQLLSDIVLHQLHGRPALDWLLDHRDTHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRAANQKGVMLDWVKKLHQEGILSQMVDKDLKGNFDANELEEMVQVALLCTQFNALHRPKMSEVLKMLEGDGLAERWEEASQTTETRFRSFENPPQRYSDFIEESSFILEAMELSGPR 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0965 497 SMART serkin_6 259 447 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0965 497 Gene3D Phosphorylase Kinase; domain 1 228 287 - -
Lele54g0965 497 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 11 284 - -
Lele54g0965 497 SUPERFAMILY L domain-like 32 163 - -
Lele54g0965 497 FunFam Leucine-rich repeat receptor-like kinase 33 160 - -
Lele54g0965 497 Gene3D Ribonuclease Inhibitor 31 180 IPR032675 -
Lele54g0965 497 SUPERFAMILY Protein kinase-like (PK-like) 236 448 IPR011009 -
Lele54g0965 497 Gene3D Transferase(Phosphotransferase) domain 1 299 467 - -
Lele54g0965 497 Pfam Protein tyrosine and serine/threonine kinase 331 447 IPR001245 GO:0004672|GO:0006468
Lele54g0965 497 Pfam Leucine rich repeat N-terminal domain 32 70 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0965 Lele-ChrLele54 15984333 15988356 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0965 1 497 Receptor kinase-like Gene Family AT5G16000 44.620 1.99e-165 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele54g0965 PK_Tyr_Ser-Thr 1.6e-08 CL0016