Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0957 ATGTCAACACTCAACGAGCTTAATCTTCAAGAACAGATATGTTACGTGCAATGTGGATTCTGCACCACCATGTTACTGGTCAGTGTTCCATGCAGAAGTTTATCAATGGAGGTGACTGTGAGGTGTGGGAACTGCACAAACCTCCTCTCTGTGAATATGATGGAAGCTTCTTTTGTCCCCTTTCAACTATTTCCTTCTCTTACTTGTCTTGATCAGCCCAAAGAAGGTAGTCCAGAAGAAAATGCAACGGACAAGAGTACTTGTTCTGATAGTGGCGAAGATGATGCAATTAATGAACGACCAGGGAAAAGACAAAAAACACCATCGGCTTATAATCGCTTCATCAGAATATTGGCATATGTTGATGATGATGATGATGCAGAGAAGAGATCAGAAGGCTGA 402 0.4179 MSTLNELNLQEQICYVQCGFCTTMLLVSVPCRSLSMEVTVRCGNCTNLLSVNMMEASFVPFQLFPSLTCLDQPKEGSPEENATDKSTCSDSGEDDAINERPGKRQKTPSAYNRFIRILAYVDDDDDAEKRSEG 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0957 133 MobiDBLite consensus disorder prediction 72 109 - -
Lele54g0957 133 MobiDBLite consensus disorder prediction 77 102 - -
Lele54g0957 133 Pfam YABBY protein 9 116 IPR006780 GO:0007275
Lele54g0957 133 PANTHER PROTEIN YABBY 6-RELATED 1 116 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0957 Lele-ChrLele54 15933989 15935729 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0957 2 116 C2C2-YABBY Transcription Factor Family AT1G23420 48.951 8.46e-30 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele54g0957 YABBY 1.6e-26 CL0114