Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0942 ATGTCGCGACCGGCACCGCCCCCTTCAAAGTCGGTCCCGCCGCCACCAAAGCAGGTTGAAGAGGGTATTGAATCTGGTTCGAATCATCCTTCACCTCCCCACTCACAAAGACTTAACGCTGGTTCAAATACAAGACCAAGTGGTTCTTCTAACGACTCCGTGCCGTCAACGTCAGGAGGTGACGGTGGCAGTAGCGGCGACGTTAATGCAGTAAAATATGTGGGTATTCCATTCACCGGAGTCTGCATCGTTGTCTTTGTTGGTTTATGTTTTTTGGTCGCGAAAATAAGAAAGAGAAATCGAGAGGCCGTCCATGACGTATCACATATACCGCCAAATACCAAAGTAGGTGAAGATTGGCGTTACTCCGGATTACAGCCCCTGCAAGATGGCCACTGCCAAAAAGGGTGTCATACGGGAACTTCAGAGTCAGCGCAGCCTACGAGTGCTCAGACTGCTTTTAGCTATGAAAGTATTGTGGAGATAACAAATGGGTTTTCTAGCCACCCAACGATTATCCAGAGAGATATAAAGTCAGCAAATATACTTTTGGATGATGCTTATGTGGCCAAGGTTTCAGACTTTGGACTTGCGAGGCTAACAGATGATGCTAATACTCGTGTATTAACCCGCGTCATGGGGACCTTTGGGTACATGGGTCCAGAAATGATCGACGCAGCTGCAGCATGTGTTTGCCATTCTGCTCCAAAACGGCCTCGGATGCTTCATGTCGCAAGAGCCACAGATAGTGGAGGTGAACTAGTTGATCTATCCAACGGAGTGAAATATGGTCAGAGCACTGCTTATCAGTCTGGACAGTATGATAAAGAAATTATGAGATTTAGGATGATGAATGGTGTAAGCTTTGGCATTTCTGAATTATGA 885 0.4678 MSRPAPPPSKSVPPPPKQVEEGIESGSNHPSPPHSQRLNAGSNTRPSGSSNDSVPSTSGGDGGSSGDVNAVKYVGIPFTGVCIVVFVGLCFLVAKIRKRNREAVHDVSHIPPNTKVGEDWRYSGLQPLQDGHCQKGCHTGTSESAQPTSAQTAFSYESIVEITNGFSSHPTIIQRDIKSANILLDDAYVAKVSDFGLARLTDDANTRVLTRVMGTFGYMGPEMIDAAAACVCHSAPKRPRMLHVARATDSGGELVDLSNGVKYGQSTAYQSGQYDKEIMRFRMMNGVSFGISEL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0942 294 ProSiteProfiles Protein kinase domain profile. 1 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0942 294 MobiDBLite consensus disorder prediction 1 64 - -
Lele54g0942 294 Gene3D Transferase(Phosphotransferase) domain 1 156 235 - -
Lele54g0942 294 MobiDBLite consensus disorder prediction 1 15 - -
Lele54g0942 294 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 169 223 - -
Lele54g0942 294 MobiDBLite consensus disorder prediction 24 64 - -
Lele54g0942 294 Pfam Protein kinase domain 171 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0942 294 SUPERFAMILY Protein kinase-like (PK-like) 169 227 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0942 Lele-ChrLele54 15852592 15855419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0942 223 293 Trihelix Transcription Factor Family AT1G70460 57.746 1.56e-19 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lele54g0942 Pkinase 4e-12 CL0016