Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0934 ATGTTCACAGAACAACCTGAGGGACAAATGGCTTCATCGATGAGGATCTCAAGGCTGCTCTCTCGCTCTCTTGCTTCTTCTTCTTTGTTTGCTCGAGGAGGTGGGAATGGTTACTTGCCCAGAGGGCTGAGTAAATACAGTACGGGTTCTGCTGCGGCTCTTGAAGAGCCGATTAAGCCGTCGATTCAAGTGGAACACACTCAGCTCCTGATCGGTGGGAAATTCGTGGATGCTGCTTCTGGCAAAACTTTTCCAACGTTGGACCCCAGGACAGGGGAAGTAATTGCCCATGTTGCTGAAGGTGACTCTGAAGATGTAGATCGAGCAGTTGTAGCTGCACGCAAGGCATTTGATGAAGGGCCTTGGCCTAAAATGACAGCCTATGAAAGACAAAAGATATTATTACGTGCAGCTGATCTTATTGAGAAGCATAACGATGAGCTGGCGACACTAGAGACCTGGGATAACGGGAAGCCATATGCCCAAGCTGCCCAGATTGAAGTTCCAATGTTGGTTCGTCTAATTCGATACTATGCTGGTTGGACTGATAAGATTCATGGCCTCACGGTTCCTGCTGATGGACCACATCATGTGCAAACATTGCATGAACCAATTGGTGTTGCCGGTCAGATCATTCCCTGGAACTTCCCTCTTCTCATGTTTGCATGGAAGGTTGGGCCTGCGTTGGCATGTGGTAACACTGTCGTTTTGAAAACAGCCGAACAAACGCCATTGTCTGCCTTATATGCAGCAAAGCTATTCCATGAGGCTGGGCTTCCTTCTGGTGTTTTAAATATTGTATCTGGCTTTGGTCCAACTGCTGGTGCTGCTGTTGCTAGTCACATGGATATTGACAAGGTTGCTTTTACTGGATCAACTGATACTGGAAAAATCGTCCTTGAACTGGCGGCAAAAAGTAATCTCAAGACTGTAACTTTGGAACTTGGAGGGAAATCCCCCTTCATTGTATGTGAAGATGCTGATGTAGATCTAGCTGCAGAGCTAGCACACTTTGCATTATTCTTTAATCAGGGACAATGCTGCTGTGCTGGTTCTCGTACATTTGTACATGAAAGTATATATGATGAATTCGTTGAAAAAGCAAAGGCAAGTGCCTTGAAACGTACTGTTGGGGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCTGAACAATTTGAGAAGATACTGAAGTATATAAGATCTGGTGTTGAAAATGGAGCCACTCTAGAAACTGGAGGAGAGAGACTAGGAGATAAAGGCTTCTATATCAAGCCCACTGTGTTTACAAATGTCCAGGACAATATGGCAATTGCGAAGGAAGAGATTTTTGGCCCTGTGCAATCCATTTTGAAATTCAAGGATATCGATGAAGTGATTAGAAGAGCAAACAATTCTCGCTATGGCCTTGCAGCCGGGGTGTTCACGAAAAACATCGCCACAGCAAACACTCTAACTAGAGCACTGCGAGTTGGGACAGTGTGGGTAAATTGCTTTGATACATTTGATGCTGCAATTCCTTTTGGAGGGTACAAGATGAGTGGACAAGGCAGAGAAAAAGGGATTTACAGTCTTAAAAATTACTTGCAAGTGAAGGCCGTTGTTACTCCCTTAGAGAACCCAGCATGGCTTTGA 1644 0.4513 MFTEQPEGQMASSMRISRLLSRSLASSSLFARGGGNGYLPRGLSKYSTGSAAALEEPIKPSIQVEHTQLLIGGKFVDAASGKTFPTLDPRTGEVIAHVAEGDSEDVDRAVVAARKAFDEGPWPKMTAYERQKILLRAADLIEKHNDELATLETWDNGKPYAQAAQIEVPMLVRLIRYYAGWTDKIHGLTVPADGPHHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSALYAAKLFHEAGLPSGVLNIVSGFGPTAGAAVASHMDIDKVAFTGSTDTGKIVLELAAKSNLKTVTLELGGKSPFIVCEDADVDLAAELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKASALKRTVGDPFKGGIEQGPQIDSEQFEKILKYIRSGVENGATLETGGERLGDKGFYIKPTVFTNVQDNMAIAKEEIFGPVQSILKFKDIDEVIRRANNSRYGLAAGVFTKNIATANTLTRALRVGTVWVNCFDTFDAAIPFGGYKMSGQGREKGIYSLKNYLQVKAVVTPLENPAWL 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0934 547 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 319 508 IPR016163 GO:0016620
Lele54g0934 547 CDD ALDH_F2BC 64 539 - -
Lele54g0934 547 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 53 537 - -
Lele54g0934 547 SUPERFAMILY ALDH-like 62 541 IPR016161 GO:0016491
Lele54g0934 547 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 341 352 IPR016160 GO:0016491
Lele54g0934 547 FunFam Aldehyde dehydrogenase, putative 509 535 - -
Lele54g0934 547 FunFam Mitochondrial aldehyde dehydrogenase 2 319 508 - -
Lele54g0934 547 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 81 537 IPR016162 GO:0016491
Lele54g0934 547 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 71 334 - -
Lele54g0934 547 Pfam Aldehyde dehydrogenase family 75 537 IPR015590 GO:0016491
Lele54g0934 547 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 313 320 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0934 Lele-ChrLele54 15783285 15789403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0934 12 547 Aldehyde Dehydrogenase Gene Family AT3G48000 76.022 0.0 870
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele52g1104 52 7496288 7503979 Lele54g0934 54 15783285 15789403 CCT
Lele49g1058 49 6809220 6811304 Lele54g0934 54 15783285 15789403 CCT
Lele50g1144 50 7640059 7641597 Lele54g0934 54 15783285 15789403 CCT
Lele51g1070 51 6905409 6907493 Lele54g0934 54 15783285 15789403 CCT
Lele53g0954 53 19154958 19158988 Lele54g0934 54 15783285 15789403 ECH
Lele54g0934 54 15783285 15789403 Lele54g0934 54 15783285 15789403 ECH
Lele54g0934 54 15783285 15789403 Lele55g0519 55 3314740 3318743 hybridization
Lele54g0934 54 15783285 15789403 Lele56g0505 56 3692020 3697252 hybridization