LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele54g0930	ATGGATCTGGAATCTGGAATTTCTAAAAGTTATGTTGCTAAGAAAGAATCGTGGAAGACGGTTCTAACTTTGGCATACCAGAGCCTCGGAGTTGTTTATGGAGATTTAAGCACTTCACCGTTATACGTATACAGGAGCACATTTGCTGAAGATATTGGGCACACAGAGAGCAACGAAGAGATTTATGGCGTCTTATCTTTGGTTTTCTGGACTTTCACTTTGGTCCCTCTGATCAAATACGTGTTCATCGTTCTCAGAGCTGATGATAATAGCGAAGGGGGTACATTTGCCCTGTACTCCTTGCTGTGTCGACACGCTCGAGTCAACTCAATGCCCAATTGCCAGGTGGCGGACGAGGAGCTCTCTGAGTATAAGAAAGATGGTTTTTGTATGGCCCCAGAGAGAAGCTTTGCGTCGAGATTGAAGGCCACTTTGGAGAAGCACAAGGTTCTGCAGAGGATTTTGCTTGTTCTTGCTTTGATTGGAACTTGCATGGTGATTGGTGATGGCGTCCTCACACCTGCGCTTTCTGTTTTCTCTGCGGTTTCAGGCCTTGAGCTTTCTATGTCCAAGGAACATCACAGATATGTAGAAGTCCCGGCTGCGTGTGTCATACTTATAATCTTGTTTGCCCTACAACATTTCGGCACGCACAGGGTTGGCTTCTTGTTTGCTCCTATAGTGATCACGTGGCTTTTCTGCATCAGTGCGATCGGTGTATATAATATATTTTACTGGAATCCTCATGTGTATAAGGCCCTGTCTCCTTATTATGGTTTCCAATTTTTAAGGAAAACACAAAAGGGAGGTTGGATGTCTCTTGGTGGAATTTTGCTGTGCATAACAGGATCAGAAGCCATGTTTGCTGATCTCGGGCACTTTTCACAATTATCAATCAAGATTGCTTTCACTGCTGTGGTTTATCCATCTTTAATTCTCGCATATATGGGCCAAGCCGCTTATCTCTCTAGACATCATGACATTGCACATGATTATCACTTCACATTTTACGTATCTGTACCGGAGAAATTAAGATGGCCCGTTCTGGTGATAGCCATACTCGCTGCAGTTGTCGGAAGCCAAGCCATAATCACTGGAACTTTCTCAATCATCAAGCAGTGTTCTGCATTGAGTTGCTTCCCAAGAGTGAAAGTGATACACACGTCATCAAAAATTCATGGCCAAATTTATATCCCTGAGATCAACTGGCTACTGATGTTCTTGTGCTTGGCTGTCACAATTGGTTTCAGAGACACGAAGCGCTTAGGCAATGCATCAGGTCTGGCTGTTATTACGGTGATGCTGGTCACGACGTGTTTGATGTCTCTGGTGATTGTACTATGCTGGCACCAGAGTGTTTTTCTTGCGCTCGGATTTGTTTTCGTCTTTGGGACGGTCGAGGCTCTCTTCTTCTCGGCTTCTCTTGTCAAGTTCCTGGAAGGAGCATGGGTGCCAATTGCTTTGGCGTTTGTATTCCTTACTGTCATGTATATTTGGCACTATGGCACTCTCAAAAAGTATGAATTTGATGTTCAAAACAAGGTCTCTATCAACTGGCTACTCAGCCTCGGTCCCAGCATAGGTATTGTTCGAGTCCGTGGCATCGGCCTTATCCACACAGAGCTAGTGTCTGGAATTCCTGCAATCTTCTCCCACTTTGTGACGAACCTCCCCGCATTCCACCAGGTCGTGGTCTTCCTCTGCATCAAACATGTCCCAGTTCCACATGTTGGACCCGAGGAACGATTCCTGGTGGGCCGAATAGGCCCAAGAGACTTCAGACTTTACCGGTGCATCGTGCGATATGGATACCGTGATGTCCACAAGGATGACATCGAGTTTGAGAAGGACCTCGTGTGCAGCATAGCAGAGATGATGCGAACCGACACCGAAAGATCCAATGATGCTGCAAACAAAGAAGCTGAAAAAGACGACAAAATGACAGTTGTCGGAACATGTCCTTCCCACCCCATTTCGATGAGCGATGAAGATACATTGGACAATGACAGCAGTAACAGTAGCTTAGAGTCAGCCGGAACATTGACAGAGCTCAAGGAAATAAAGTCACCGAAAGCGATCCAACCGAAGAAAAGGGTGAGGTTCGTCGTACCGGAAACTCCAAAGATCGATAACGAGGCTAAGGAAGAATTGGAGGGACTAATGGAAGCAAGGGAATCTGGGGTAGCCTACATCATGGGGCACTCATATATGAGAGCAAAACCAGGATCAAGTTTGATGAAGAAGCTGGTGATTAATTTTGGGTATGAATTCTTGAGAAGAAATAGCAGATCACCTTCCTTTGTAGATAGCGGACCTCATGCATCATCTTTAGAAGTAGGGATGATGTACCAAGTTTAA	2358	0.4534	MDLESGISKSYVAKKESWKTVLTLAYQSLGVVYGDLSTSPLYVYRSTFAEDIGHTESNEEIYGVLSLVFWTFTLVPLIKYVFIVLRADDNSEGGTFALYSLLCRHARVNSMPNCQVADEELSEYKKDGFCMAPERSFASRLKATLEKHKVLQRILLVLALIGTCMVIGDGVLTPALSVFSAVSGLELSMSKEHHRYVEVPAACVILIILFALQHFGTHRVGFLFAPIVITWLFCISAIGVYNIFYWNPHVYKALSPYYGFQFLRKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTAVVYPSLILAYMGQAAYLSRHHDIAHDYHFTFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVIHTSSKIHGQIYIPEINWLLMFLCLAVTIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHQSVFLALGFVFVFGTVEALFFSASLVKFLEGAWVPIALAFVFLTVMYIWHYGTLKKYEFDVQNKVSINWLLSLGPSIGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKHVPVPHVGPEERFLVGRIGPRDFRLYRCIVRYGYRDVHKDDIEFEKDLVCSIAEMMRTDTERSNDAANKEAEKDDKMTVVGTCPSHPISMSDEDTLDNDSSNSSLESAGTLTELKEIKSPKAIQPKKRVRFVVPETPKIDNEAKEELEGLMEARESGVAYIMGHSYMRAKPGSSLMKKLVINFGYEFLRRNSRSPSFVDSGPHASSLEVGMMYQV	785

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele54g0930	785	MobiDBLite	consensus disorder prediction	629	681	-	-
	Lele54g0930	785	MobiDBLite	consensus disorder prediction	629	649	-	-
	Lele54g0930	785	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	13	784	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele54g0930	785	Pfam	K+ potassium transporter	26	606	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele54g0930	785	TIGRFAM	kup: potassium uptake protein	24	785	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele54g0930	785	MobiDBLite	consensus disorder prediction	654	680	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele54g0930	Lele-ChrLele54	15748739	15752607	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele54g0930	1	785	Inorganic Solute Cotransporters	AT1G70300	75.476	0.0	1213