Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0929 ATGAAGGATAAGAGTCTTTGGTTTTGCAGTATTCTTCTGCTTTGTGGCTTGACTTTGACGTTTTGGCAGGGAGTTTATGATCAGGCGTTGTGGAATTTTCGTAATGCCTTGAGAGTTGACATGTCATTTGAATACGCCAGAAGGCATGATAGCAGGCAGGATGTTATGAGAAAGAAAGTTTCCCTACTACTGGCCATGGCATCAAGATCATATGCTAATCTCCTAGACTTAGCAAGTGGAGACATATTGGCTATTCCTCACACCCCAAGAACTCTTCCAAGGATTGTTACAGTTCCAGGAATTATTTCAGATCTGGATCGTCAAGGTTCTAATGATGGGGATTCAGATGTCAGCTCTTCTGGTTGTCGAGAGCGGAAAATTATTGTGGCAAACATGCTGCCATTGCAGGCTAAAAGGGACCCACAAACTTCTAAATGGTTCTTCAGCTTGGATGAGGATTCACTTTTATTACAACTGAAAGATGGATTTTCTTCTGATACTGAAGTGATCTATGTGGGATCCCTTAAGGTTGAAATAGAGTCCAGTGAGCAGGAAGAAGTTGCTCAGAAATTAATGGACAACTTCAACTGCGTGCCTACTTTTCTACCTCATGATCTCCAGAAAAAGTTTTATCTTGGCTTTTGTAAGCAGCAATTGTGGCCTCTCTTTCATTATATGCTACCTATGTGTCCAGATCATGGTGACCGCTTTGACCGAACACTTTGGCAGGCTTATGTTTCTGCTAACAAAATATTTGCGGATAAGGTTATGGAAATAATTAATCCTGATGATGATTTTGTGTGGGTTCATGACTATCACTTGATGGTCTTGCCTACTTTTCTAAGGAAGAGATTTAATCGGGTTAAACTTGGTTTCTTCCTTCATAGTCCTTTCCCTTCATCTGAAATTTACCGAACTTTGCCAGTACGAGATGAAATTCTCAGGGGATTGTTGAATTCTGACTTAATTGGTTTTCACACATTTGATTATGCACGCCACTTCCTCTCTTGCTGCAGTAGAATGCTCGGTCTGGACTATGAATCTAAGCGAGGACATATAGGACTTGATTATTTTGGCCGCACTATATTTATCAAGATTTTGCCTGTAGGCATTCATATTGGTAGGCTCGAATCTGTATTAGATCTTTCTTCTACATCTGCTAAAATAAAAGAAATCCAGGAAGAGTTTAAGGGTAGGAAAGTGATTCTTGGTGTTGATGATATGGATATTTTCAAGGGCATCAGCTTGAAACTACTAGCACTAGAGCAGCTGCTGCATCAGCAGCCCGATTTGCTGGGCAAAATTGTACTAGTTCAAATTGTGAATCCTGCCAGGGGTTCTGGGAAGGATGTTCAGGAAGCAAAGAAGGAAACATATTTAATTGCCCAGAGGATCAATGATACTTATGGTTCACCCCATTATCTACCAGTCATTCTCATCGATCGTCCTGTTCCTCGTTTTGAGAAGAGTGCCTATTATGCTATAGCAGAATGTTGCATTGTCAATGCTGTGAGGGATGGCATGAACTTGGTCCCTTACAAATACGTTGTCTGCAGACAAGGAACTTCAAAACTGGATCAAGCATTGGGTAGAGAAAATGATGCTCCTCGTACAAGCATGCTTGTTGTATCAGAATTTATTGGCTGTTCACCTTCCTTAAGTGGAGCAATTAGGGTTAACCCCTGGGATATAGATGCTGTTGCTGAAGCTTTGAATTTGGCTATTACAATGCATGATTCAGAGAAGAAATTGCGGCATGAGAAGCACTATCGGTATGTCAACTCCCATGATGTGGCTTATTGGGCACGTAGTTTTATGCAGGATTTGGAGAGAGCATGCAAAGATCATTACACCAAAAGGTGCTGGGGAATTGGTCTGGGCCTAGGGTTCAGAGTTGTTTCTCTTAATCCCGGTTTTAGGAAGTTGTCTGTTGATCACATTGTTTCAGCATACAAGAGAACTAAAAGGAGGGCAATATTTCTTGATTACGATGGTACTGTTGTACCAAAATCTTCCATAAATAAAATCCCCAGCCCTCAAGTCATATCTGTTCTGAATACTTTGTGCAATGATCCCAAGAACACTGTTTTCATTGTTAGTGGGAGGGGAAGAGATTCGTTGAGTGATTGGTTTGCTTCATGCAAATTGCTGGGACTTGCTGCTGAACATGGGCACTTCTTAAGGTGGAGTAGTTCCTCCCATTGGGAAACAAGTAACATGTGTGCTGACCTTGATTGGAAAAATGTCGTGGAACCCATAATGAGGCTATACATAGAAGCAACTGATGGATCTAATATTGAAATTAAGGAAAGTGCATTGGTGTGGCATCATCAAGATGCAGACCTGGATTTTGGTTCTTGCCAAGCCAAGGAATTGTTGAATCACCTTGAAAGCGTGCTTGCTAATGAACCTGCTGTTGTTAAGAGGGGCCAACATATTGTTGAAGTTAAGCCACAGGGAGTAAGCAAGGGTTTGGTAGCTGAAAAGGTTCTTATGACTATGGTCAATGATGGAGATCCGCCAGATTTTGTTTTGTGCGTTGGAGATGATAGGTCTGATGAAGACATGTTTGAGAGCATACTAGGGACAATCTCTTGTCCATCAGTGCCAGTCGCTCCAGAAATCTTTGCCTGCACCGTTGGCCAGAAGCCTAGCAAGGCCAAGTATTATCTCGACGACGCTGCTGATGTGGTAAAATTACTTCAGGGCCTTGGTACTGCATCAAATCCAAAGCCTAGGCATTTAGCCCATTTCCAGGTTTCTTTTGAGAGCACAGTTTGA 2781 0.4186 MKDKSLWFCSILLLCGLTLTFWQGVYDQALWNFRNALRVDMSFEYARRHDSRQDVMRKKVSLLLAMASRSYANLLDLASGDILAIPHTPRTLPRIVTVPGIISDLDRQGSNDGDSDVSSSGCRERKIIVANMLPLQAKRDPQTSKWFFSLDEDSLLLQLKDGFSSDTEVIYVGSLKVEIESSEQEEVAQKLMDNFNCVPTFLPHDLQKKFYLGFCKQQLWPLFHYMLPMCPDHGDRFDRTLWQAYVSANKIFADKVMEIINPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTIFIKILPVGIHIGRLESVLDLSSTSAKIKEIQEEFKGRKVILGVDDMDIFKGISLKLLALEQLLHQQPDLLGKIVLVQIVNPARGSGKDVQEAKKETYLIAQRINDTYGSPHYLPVILIDRPVPRFEKSAYYAIAECCIVNAVRDGMNLVPYKYVVCRQGTSKLDQALGRENDAPRTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVAEALNLAITMHDSEKKLRHEKHYRYVNSHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVVSLNPGFRKLSVDHIVSAYKRTKRRAIFLDYDGTVVPKSSINKIPSPQVISVLNTLCNDPKNTVFIVSGRGRDSLSDWFASCKLLGLAAEHGHFLRWSSSSHWETSNMCADLDWKNVVEPIMRLYIEATDGSNIEIKESALVWHHQDADLDFGSCQAKELLNHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLMTMVNDGDPPDFVLCVGDDRSDEDMFESILGTISCPSVPVAPEIFACTVGQKPSKAKYYLDDAADVVKLLQGLGTASNPKPRHLAHFQVSFESTV 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0929 926 FunFam Alpha,alpha-trehalose-phosphate synthase 379 594 - -
Lele54g0929 926 SUPERFAMILY HAD-like 657 904 IPR036412 -
Lele54g0929 926 Gene3D - 786 917 IPR023214 -
Lele54g0929 926 Gene3D - 656 774 IPR023214 -
Lele54g0929 926 Pfam Trehalose-phosphatase 660 893 IPR003337 GO:0003824|GO:0005992
Lele54g0929 926 CDD HAD_TPP 658 899 - -
Lele54g0929 926 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 656 773 - -
Lele54g0929 926 TIGRFAM T6PP: trehalose-phosphatase 655 903 IPR003337 GO:0003824|GO:0005992
Lele54g0929 926 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 125 614 - -
Lele54g0929 926 CDD GT20_TPS 125 610 IPR001830 GO:0003824|GO:0005992
Lele54g0929 926 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 658 859 IPR006379 -
Lele54g0929 926 Gene3D Glycogen Phosphorylase B; 378 595 - -
Lele54g0929 926 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 118 377 - -
Lele54g0929 926 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 786 917 - -
Lele54g0929 926 Gene3D Glycogen Phosphorylase B; 119 377 - -
Lele54g0929 926 FunFam Trehalose-6-phosphate synthase 2 740 819 - -
Lele54g0929 926 Pfam Glycosyltransferase family 20 125 610 IPR001830 GO:0003824|GO:0005992
Lele54g0929 926 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 94 905 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0929 Lele-ChrLele54 15734596 15740064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0929 66 926 Trehalose Biosynthesis Gene Families AT1G23870 73.818 0.0 1363