Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0904 ATGCCGAAGGATAGATCAAAATCGGAGAGGCGCGATGCTGCAAAGCAGCTCCGGCGGGACCCCTATGAGGTTCTTGGCGTCCTGCGGAACTCAACTGACCAAGAAATTAAAACTGCTTACCGGAAATTGGCACTCAAATATCATCCTGACAAGAATGCTAATGATCCTAAAGCAGCGGATATGTTTAAAGAGGCCACCTTTTCATATAATATCTTGTCAGATCCTGAAAAACGCCATCAGTATGACTCTTCTGGTTTTGAGGCTGTTGAATCCGATAACCAAGACTTGGAGTTGGATCTTTCGAGTTTAGGTGCTGTGAATACAATGTTTGCAGCACTTTTTAGTAAACTTGGTGTGCCAATTAAGACAACTGTATCAGCAACTGTCTTGGAAGAGGCACTTAATGGGGCAGTGATCATTCATCCACTTCCATTGGGACTGCCTATATCTAAAAGGGTTGAGAGGCAATGTGCTCACTTTTATTCAGTTACGTTATCAGAAGAAGAAGCACAGGATGGATTTGTTTGCCGTGTGCAATCATCAGACAAAAGCAAGTTCAAGTTACTACATTTTGACCAAGAAGAGACTGGTGGACTAAGTCTTGCCCTCCAGGAAGACAGTGCAAAAACAGGGAAGGTAACTTCTGCGGGAATGTATTTTCTTGGGTTTCCTGTTTATCAATTGGATCAAACCATGAATTCAACAGCTGCTGCTAAGGATCCTGATGCATCATTTTTCAGAAAGCTAGATGGGTTCCGATCATGTGAAATAACAGAACTAAAGGCTGGTACTCATGTATTTGCCGTTTATGGTGACAATTTTTTCAGAAGCGCAAGCTACACTATAGAAGCTTCATGTGCTGCGCCTTTTAGTCAAGAAAAAGAAAATCTCAGAAGCGTAGAGGCCCAAATTTTATTTAAAAGGGCGGGCCTAACGAAGTTTGAGTCCGAATACCGAGAGGTTCTGGCACAATTTACACAGATGACAAGTAGATATACACAAGAAATGCAAGCGATTGATGAGCTACTTAAGCAAAGGAATGAAATACGTGCATCATATACTGTTGCTCCATTAAAACGAAGTAGGACAAAGAGGAGTAAAAGTTCTTCCAAGGAGGAACGAGAAGATGACCAAGCAAGGGAGAAGAGACATACAAGGGAGCGACTGAGGAAGAAGAAATGGTATAACATCCACTTGAAAGCTGATAAGAGAAAAGCTTGCTAA 1224 0.4199 MPKDRSKSERRDAAKQLRRDPYEVLGVLRNSTDQEIKTAYRKLALKYHPDKNANDPKAADMFKEATFSYNILSDPEKRHQYDSSGFEAVESDNQDLELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGAVIIHPLPLGLPISKRVERQCAHFYSVTLSEEEAQDGFVCRVQSSDKSKFKLLHFDQEETGGLSLALQEDSAKTGKVTSAGMYFLGFPVYQLDQTMNSTAAAKDPDASFFRKLDGFRSCEITELKAGTHVFAVYGDNFFRSASYTIEASCAAPFSQEKENLRSVEAQILFKRAGLTKFESEYREVLAQFTQMTSRYTQEMQAIDELLKQRNEIRASYTVAPLKRSRTKRSKSSSKEEREDDQAREKRHTRERLRKKKWYNIHLKADKRKAC 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0904 407 PRINTS DnaJ domain signature 22 40 IPR001623 -
Lele54g0904 407 PRINTS DnaJ domain signature 40 55 IPR001623 -
Lele54g0904 407 PRINTS DnaJ domain signature 77 96 IPR001623 -
Lele54g0904 407 PRINTS DnaJ domain signature 57 77 IPR001623 -
Lele54g0904 407 MobiDBLite consensus disorder prediction 354 389 - -
Lele54g0904 407 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Lele54g0904 407 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Lele54g0904 407 FunFam Chaperone protein dnaJ 16 4 102 - -
Lele54g0904 407 Gene3D DnaJ domain 4 103 IPR036869 -
Lele54g0904 407 SMART dnaj_3 19 77 IPR001623 -
Lele54g0904 407 CDD DnaJ 20 74 IPR001623 -
Lele54g0904 407 MobiDBLite consensus disorder prediction 366 384 - -
Lele54g0904 407 Pfam DnaJ domain 20 82 IPR001623 -
Lele54g0904 407 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 5 406 - -
Lele54g0904 407 SUPERFAMILY Chaperone J-domain 19 89 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0904 Lele-ChrLele54 15567869 15570732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0904 13 83 C2H2 Transcription Factor Family AT1G74250 39.474 2.51e-10 60.5