Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0889 ATGATGCCTGTCACGTGCTCACAGTGCGGTACCATCGGCCACAACTCCCGAACATGCGCCGACGGCAACAACTGCGCCGGTGAGAAAACTATCTTACTCTTTGGGGTGCGAGTCACGCAAGGGAACTCGTTCAGGAAGAGCGCTAGCATGACTGATCTATCCCAGTACGAGCAGCCGCTGCCTCAGGATTCCAACACCCAAGCCGGTTATTCCTCCGATGATGTCGTTCACGCTTCCGGTCGTAGCCGCGAGCGGAAGAGAGGCGTTCCATGGACGGAGGAGGAGCACAGGCTATTCCTGTTGGGGCTTCAACAGGTAGGGAAAGGTGATTGGAGAGGGATTTCTAGAAACTTCGTGAAAACGCGTACATCAACTCAGGTAGCCAGTCACGCTCAGAAGTACTTCCTTCGCCGGCATAATCGTAACCGGAGACGACGGAGATATAGTCTGTTTGATATCACCACTGACGCGGTGACGGAATCCTCAACGACAATGGAAGAAGGGAGAGTCCTCCAAGAGGCAGTACCACGCAAATATCCCCATTACGGTGGCTTTGGCGGTTCTGCTTTTCAGATGACGCTGTCCCCGCCTATGACACCGATGGGAGCTAAGGTGATAAGGCCTACGCCGATTCTGCCAGTTGCTCCATCGTCAAAAATGGCAAACTTACATTTGAGTGAGGAAGGTCACTTGGTCGAGTCTCTGCCGGCGAGCAAGGAGAAGTCGTCGTTGGCTTTTGAGGTGATGCCAGGAAAGCTTAACGGCGGCGGTGATGGCAATAACATGATCAGTGTTGCTTGA 801 0.5356 MMPVTCSQCGTIGHNSRTCADGNNCAGEKTILLFGVRVTQGNSFRKSASMTDLSQYEQPLPQDSNTQAGYSSDDVVHASGRSRERKRGVPWTEEEHRLFLLGLQQVGKGDWRGISRNFVKTRTSTQVASHAQKYFLRRHNRNRRRRRYSLFDITTDAVTESSTTMEEGRVLQEAVPRKYPHYGGFGGSAFQMTLSPPMTPMGAKVIRPTPILPVAPSSKMANLHLSEEGHLVESLPASKEKSSLAFEVMPGKLNGGGDGNNMISVA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0889 266 Gene3D - 91 140 - -
Lele54g0889 266 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 86 137 IPR006447 GO:0003677
Lele54g0889 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 139 IPR017930 -
Lele54g0889 266 MobiDBLite consensus disorder prediction 49 73 - -
Lele54g0889 266 CDD SANT 90 135 IPR001005 -
Lele54g0889 266 ProSiteProfiles SANT domain profile. 86 139 IPR017884 -
Lele54g0889 266 ProSiteProfiles Myb-like domain profile. 83 135 IPR001005 -
Lele54g0889 266 SMART sant 87 137 IPR001005 -
Lele54g0889 266 Pfam Myb-like DNA-binding domain 90 135 IPR001005 -
Lele54g0889 266 FunFam transcription factor MYB1R1 89 140 - -
Lele54g0889 266 PANTHER TRANSCRIPTION FACTOR KUA1 6 224 - -
Lele54g0889 266 SUPERFAMILY Homeodomain-like 85 138 IPR009057 -
Lele54g0889 266 MobiDBLite consensus disorder prediction 49 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0889 Lele-ChrLele54 15413299 15414304 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele54g0889 Myb_DNA-binding 2.9e-10 CL0123