Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0887 ATGACCTTCATCTTTCTAGGTGCTTTAATCTTTCTCCTTCATTCATCATCGCTTTGTGTTTCCATCGAGGATGACGTGGTTTGTCTTGAAGGTGTAAAGAACTCATTTTCCGACCCAAATGGAAAACTCAGCTCTTGGAGCTTCACCAACACTTCTGCGTCCTCAATCTGCCAGCTCGTCGGAGTTTCTTGCTGGAACGAGAAGGAGACCCGCCTCATCAGCCTCCAGCTCCGTGACATGCAGCTCGCCGGAAAACTCCCTGAGTCGCTCAAGTATTGCCGGAGCCTCCAGACCCTCGTACTCTCGGGTAACGCTCTCTCCGGTTCGATCCCTCCTTATATCTGTAGCTGGTTGCCTTATTTGGTGACCCTAGATCTCTCCGGTAACCAAATCTCGGGTTCAATCCCACCCGAGATTGTGAATTGCAAGTTCCTGAATACCCTTATTCTGAACGATAATCAATTATCGGGTTCGATCCCTTACGAACTTGGTCGGCTTGACCGATTGAAGAGGCTCTCTGTTGCCAACAACGATCTCTCTGGTTCTATTCCACCGGATTTGTCCAAATTTGACGCAGCTGATTTTGACGGGAACAGCGGATTATGCGGGAAGCCTATTGGATCAAAGTGTGGTGGATTGAGTCGTAAAAGTCTCGGGATTATTATTGCTGCTGGTGCAATTGGAGCCTTGGGATCTTTAGTTGTGGGTTTCGCTCTCTGGTGGTGGTTCTTCCTGAGAATCAGTGAGCAAAAGAAAGAGTATAATGGTTCTGGTGGTGGAAAGCCAGTGGGGGATTGGATTGATTTGTTAAAGTCACATAAGCCTGTTCAAGTTTCTTTGTTCCAGAAACCCATCGTGAAAGTCAGATTAGCTGATTTGCTAATCGCTACCAATAGCTTTCATTCAGAAAACATTGTGATTTCAAGTAGAACAGGAGTCTCTTATAAGGCGGTTCTGCGTGATGGGTCTGCTCTTGCAGTGAAGAGGCTTAATTCTTGTAAACTTGGTGGGAAGCAATTTAGATCAGAGATGAACAGATTAGGGCAGCTCAGACACCCCAATTTGGTCCCTCTATTGGGTTTCTGTATGGTGGAAGAAGAGAAACTTTTGGTGTACAAGCACATGTTCAATGGGACTTTGTATTCTCAGATGCATAAAAATGGTCATGCTAATAGTAGTCAATATAGTTGTCTGGATTGGTCAACGAGGCTGAGAATTGGGATTGGTGCTGCCAGAGGACTTGCTTGGCTTCACCATGCTTGTCAACCTCCCTATATTCACCAGAACATCAGCTCGAATATAGTCCTTCTTGACTATGATTTCGAAGCTCGGATAATGGATTTCGGATTGGCGAGTCTCGTGGTTACTCGTGATCCCAACGATAGCTCCTTTGTGAATGGTGATCTGGGTGAATTTGGTTATGTTGCTCCTGAGTACTCGGGCACCATGGTCCCTTCCCTGAAGGGAGATGTTTATGGTTTTGGAGTTGTTCTCTTGGAGTTGGTCGCTGGGATGAAGCCAGTGGAAGTGAACACTGGAGGGGAAATAGGATTCAAAGGGAATTTAGTAGATTGGGTCAATTGGTTAACAGTGACAGGGAGAGCTAAAGAAGCCATAGATAAAGCTTTGTTAAACGAAAATCCTGAACATGGTGATGAATTTATGCAGTTCATGAAGGTTGCCGTATCTTGCGTTGTTTCTAGACCTAAAGATAGGCCTTCCATGTACCAGGTTTTCTCCTCACTGAAGAGCATGGCTGAGAAACATGGTTTTGCAGACCAGTATGATGAATTCCCAGTTTTCTCGGGCAAAGAAGACTCTGACTACAACAAGAATTAG 1839 0.4541 MTFIFLGALIFLLHSSSLCVSIEDDVVCLEGVKNSFSDPNGKLSSWSFTNTSASSICQLVGVSCWNEKETRLISLQLRDMQLAGKLPESLKYCRSLQTLVLSGNALSGSIPPYICSWLPYLVTLDLSGNQISGSIPPEIVNCKFLNTLILNDNQLSGSIPYELGRLDRLKRLSVANNDLSGSIPPDLSKFDAADFDGNSGLCGKPIGSKCGGLSRKSLGIIIAAGAIGALGSLVVGFALWWWFFLRISEQKKEYNGSGGGKPVGDWIDLLKSHKPVQVSLFQKPIVKVRLADLLIATNSFHSENIVISSRTGVSYKAVLRDGSALAVKRLNSCKLGGKQFRSEMNRLGQLRHPNLVPLLGFCMVEEEKLLVYKHMFNGTLYSQMHKNGHANSSQYSCLDWSTRLRIGIGAARGLAWLHHACQPPYIHQNISSNIVLLDYDFEARIMDFGLASLVVTRDPNDSSFVNGDLGEFGYVAPEYSGTMVPSLKGDVYGFGVVLLELVAGMKPVEVNTGGEIGFKGNLVDWVNWLTVTGRAKEAIDKALLNENPEHGDEFMQFMKVAVSCVVSRPKDRPSMYQVFSSLKSMAEKHGFADQYDEFPVFSGKEDSDYNKN 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0887 612 Gene3D Ribonuclease Inhibitor 23 212 IPR032675 -
Lele54g0887 612 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 33 187 - -
Lele54g0887 612 Gene3D Transferase(Phosphotransferase) domain 1 375 601 - -
Lele54g0887 612 ProSiteProfiles Protein kinase domain profile. 300 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0887 612 SUPERFAMILY L domain-like 19 198 - -
Lele54g0887 612 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 22 211 - -
Lele54g0887 612 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 262 374 - -
Lele54g0887 612 Gene3D Phosphorylase Kinase; domain 1 263 374 - -
Lele54g0887 612 SUPERFAMILY Protein kinase-like (PK-like) 275 582 IPR011009 -
Lele54g0887 612 Pfam Protein tyrosine and serine/threonine kinase 323 581 IPR001245 GO:0004672|GO:0006468
Lele54g0887 612 Pfam Leucine rich repeat N-terminal domain 23 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0887 Lele-ChrLele54 15405778 15407616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0887 3 607 Receptor kinase-like Gene Family AT1G27190 65.455 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lele54g0887 PK_Tyr_Ser-Thr 1.9e-27 CL0016