Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0875 ATGTCGAACGGTGAGGAAGTTGTGAAGCTTCTGGGTGCATGGCCGAGCCCCTTTGTGATGAGGGCTCGCATCGCTCTCAATATTAAGTCTGTGAGTTATGAGTTCCTTCAAGAGACTTTGGGATCCAAGAGCCAGCTTCTGCTTCAGTCCAATCCTGTTCATAAGAAAATCCCAGTTCTCATTCACGGAGATAAGGCTGTTTGTGAGTCTCTCATTATTGTTGAGTACGTCGACCAAGTCTGGTCCTCTGGCCCTTCTATTCTTCCTTCTGATCCTTACGAGCGTGCCGTTGCTCGTTTCTGGGCTGCCTATCTTGACGACAAGTGGTTCCCTGCAATGAAATCCGTGGCTGATGCAAAAGGAGACGAAGAGAGGAAGGCTCTGATACAGCAATTAGAAGAAGGGCTAGCGTTAATGGAGAGTGCTTATCACAGCATTAGCAAAGGCAAGCCCTTCTTTGGTGGAGACCGGGTCGGGTATCTGGATATTGCGTTCGGGTGCTTCCTCGGGTGGCTGCGGCTCACCCAGTCGTTTTCTGGGCTCAAGTTGTTGGACCACACCAAGACACCGGGGTTGGCCCAATGGGCCGAAACATTCTGTGCTGATGATGCTGTTAAGCATGTCATGCCTGAAACTGACAAGCTTCGCGAGTTCGCTATGTCACTCAGGGCAAAAATGGCATCAAAAACTAGTTGA 696 0.5 MSNGEEVVKLLGAWPSPFVMRARIALNIKSVSYEFLQETLGSKSQLLLQSNPVHKKIPVLIHGDKAVCESLIIVEYVDQVWSSGPSILPSDPYERAVARFWAAYLDDKWFPAMKSVADAKGDEERKALIQQLEEGLALMESAYHSISKGKPFFGGDRVGYLDIAFGCFLGWLRLTQSFSGLKLLDHTKTPGLAQWAETFCADDAVKHVMPETDKLREFAMSLRAKMASKTS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0875 231 SUPERFAMILY Thioredoxin-like 8 110 IPR036249 -
Lele54g0875 231 CDD GST_N_Tau 8 81 - -
Lele54g0875 231 FunFam Glutathione S-transferase GSTU6 3 88 - -
Lele54g0875 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 215 IPR045073 -
Lele54g0875 231 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Lele54g0875 231 Pfam Glutathione S-transferase, C-terminal domain 100 202 IPR004046 -
Lele54g0875 231 SFLD Glutathione Transferase (cytosolic) 5 229 IPR040079 -
Lele54g0875 231 FunFam Glutathione S-transferase U9 88 229 - -
Lele54g0875 231 SFLD Main.3: Omega- and Tau-like 5 229 IPR045073 -
Lele54g0875 231 CDD GST_C_Tau 92 220 IPR045074 GO:0004364|GO:0006749
Lele54g0875 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 222 IPR010987 -
Lele54g0875 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Lele54g0875 231 Gene3D - 88 230 - -
Lele54g0875 231 Gene3D Glutaredoxin 1 87 - -
Lele54g0875 231 SUPERFAMILY GST C-terminal domain-like 80 225 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0875 Lele-ChrLele54 15333472 15335316 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0875 8 225 Glutathione S-transferase Gene Family AT1G10370 68.037 9.41e-109 310