Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0870 ATGTCTCCTTCCTCAACATCTCCTTTCCCCATCATCTTCTTCCTCTGCTTCATATCGCGGCTTGCTTCTGCTCACACTTGCTCTTCACATCTACAAACATTGTCGTCTTCTTCATCTTCTTCTCTCTGCCCTCCTTTCACTTCTCCAATCCCTCCTTTCCCATTCTCTTCCTCACCAGGCTGTGGCCACCCTTCCTTCCAAATTCAATGCTCCACTCCTCATTCTATCATCACCATTAACCACATAACTTTCTCTGTTCTTAGTTATAACCCCAATTCCTCTTCTCTTACCCTCTTTCCTTATCTCGATAATGCATCAGAAGCAACAAGCTCAGCCGCCCACAGAAATTGCTCCACCCCTCGCTTGCTTTCCATTCTCAATCGTCCTATTGATCTCTCTGGCTCTCCGTTCAGAATCTCCGATGCTCTCTGTTCCCGCCTCTTTGATATTCCTCCTTGCTCGCCGCCCACTCTGCCAAACTGTAGCCATTGTCCATGGGAATGTAGCCTCATCAAGAACCCAGCTTACCTCCTCCGTGACTGCAGATCTGCCCACCGTCACTCCGTTTCAGACGTAGAGGGCCGCTGCGAAAGTGACGTTTTGGGGTATCTTGATGACATACTTGCTCGAGGGATCGAGGTCGAGTGGGATGAAGCTCAAGATCCTTACTTTTCGAGCTGCAGAAACTGCAGCGCGAACAAGGGAGTTTGTGGATTCAATTCATCGGACCCACATAATCAATTTATGTGCCTTCGCTCCAAATCTGAATCTAGTTTCTCGCCTGGTTGGATTCGAAGGGTGAATCCCAAGCGGAACACAGTTTTGTCCCTTGTCATCCCTTTAATGTTGTTGATTCTTTTTGTTTCTGTCGCCACTACAATTTTCCGCTCGAGGAGATTCAAGTCATCGAGGACCGAGGAGGACCCAACAATCCTTTTTCTTCACACCCAGCGCTGTGCTAGTCTTCTTCCTCCTGTCTTCACCTACGAGGAATTGGAGACGGCGACAAATCTGTTCGACCCGAAACGCAAAATTGGTGATGGCGGGTTCGGATCGGTGTACCTGGGCCATCTCCACGATAGCAGAATCGTCGCCGTGAAGTACCTCCATAAGCACCATGCGGAGGCCGACGCGGGACGAGCTTTTTCCACCAAGTCTTTCTGCAACGAGATTTTGATTCTTTCTTCCATCGACCACCCGAATCTAGTTAAGCTTCATGGGTATTGCAGCGACCCGAGAGGATTGCTTCTGGTCTACGACTATGTCCCCAATGGAACTCTTGCAGATCATCTTCATGGCCCGAAGAGTTCGTTCGGAAAAGCGTCTCTGACGTGGCAAGTGAGGCTCGATATTGCTCTGCAAACTGCATTAGCCATGGAGTACCTCCACTGCTCTGTTGTGCCGCCAATAGTTCACAGAGATATAACTTCGTCCAACATCTTCGTGGAGAGAGACATGAGGATTAAAGTCGGAGACTTTGGGCTGTCTAGGCTATTGGTTTTGCAGGATATGTCATCGTCCTCAACTGGGTATGTCTGGACGGGCCCCCAAGGGACACCCGGATACTTGGATCCGGATTACCACCGGTCCTTCCGTTTAACGGAGAAGAGTGACGTGTATAGCTTTGGGGTGGTGTTGCTGGAGCTGATTTCTGGGTTGAAGGCGGTGGATCAGAGCAGGGACAAGCGGGAAGTCGCGTTGGCTGATCTGGTGGTCTCCAGAATCCACACGGGTCAGCTGAATCAGGTAGTGGACCCGGTTTTGGCGAAAGACGAAGTGATGGACGCCGTCGCTGCGGTGGCGGAGCTTGCATTCCGTTGTGTGGCGGCGGACAAGGACGACCGCCCGGACTCGAAAGAAGTGGTGGAGGAGCTGAAACGGGTTTGGAGCCGGACCCATGCGGGGCTCCGATCGTCGTCGAATTCCCACTTAGGTGCGGCTGAGGTGGCGAAGAACGAAGTGAGGGATTGTGGATTGTGA 1980 0.5131 MSPSSTSPFPIIFFLCFISRLASAHTCSSHLQTLSSSSSSSLCPPFTSPIPPFPFSSSPGCGHPSFQIQCSTPHSIITINHITFSVLSYNPNSSSLTLFPYLDNASEATSSAAHRNCSTPRLLSILNRPIDLSGSPFRISDALCSRLFDIPPCSPPTLPNCSHCPWECSLIKNPAYLLRDCRSAHRHSVSDVEGRCESDVLGYLDDILARGIEVEWDEAQDPYFSSCRNCSANKGVCGFNSSDPHNQFMCLRSKSESSFSPGWIRRVNPKRNTVLSLVIPLMLLILFVSVATTIFRSRRFKSSRTEEDPTILFLHTQRCASLLPPVFTYEELETATNLFDPKRKIGDGGFGSVYLGHLHDSRIVAVKYLHKHHAEADAGRAFSTKSFCNEILILSSIDHPNLVKLHGYCSDPRGLLLVYDYVPNGTLADHLHGPKSSFGKASLTWQVRLDIALQTALAMEYLHCSVVPPIVHRDITSSNIFVERDMRIKVGDFGLSRLLVLQDMSSSSTGYVWTGPQGTPGYLDPDYHRSFRLTEKSDVYSFGVVLLELISGLKAVDQSRDKREVALADLVVSRIHTGQLNQVVDPVLAKDEVMDAVAAVAELAFRCVAADKDDRPDSKEVVEELKRVWSRTHAGLRSSSNSHLGAAEVAKNEVRDCGL 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0870 659 ProSiteProfiles Protein kinase domain profile. 339 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0870 659 Pfam Protein tyrosine and serine/threonine kinase 342 625 IPR001245 GO:0004672|GO:0006468
Lele54g0870 659 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Lele54g0870 659 SUPERFAMILY Protein kinase-like (PK-like) 320 625 IPR011009 -
Lele54g0870 659 Pfam Wall-associated receptor kinase C-terminal 178 252 IPR032872 -
Lele54g0870 659 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 422 639 - -
Lele54g0870 659 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 632 IPR044652 GO:0004672
Lele54g0870 659 CDD STKc_IRAK 345 627 - -
Lele54g0870 659 ProSitePatterns Tyrosine protein kinases specific active-site signature. 470 482 IPR008266 GO:0004672|GO:0006468
Lele54g0870 659 FunFam Putative serine/threonine-protein kinase At1g18390 family 315 421 - -
Lele54g0870 659 Gene3D Transferase(Phosphotransferase) domain 1 422 648 - -
Lele54g0870 659 Gene3D Phosphorylase Kinase; domain 1 315 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0870 Lele-ChrLele54 15314458 15316437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0870 43 635 Receptor kinase-like Gene Family AT1G69910 63.132 0.0 713
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Lele54g0870 Pkinase 1.9e-42 CL0016