Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0850 ATGGGGTTGGGTGCTGATAATGATAAGGTGGAGTCTTGGGATTCCAGCAAATCAAAGGGGAAGAAGAAGAAGAAGAAAGATGATGGCGTTGTGGAAGAGGAAGAAACTGGGTGTTGGGTTGGGCTGAGGTTCATTGGCAGTTGCATTACTTCGAGATCCAAGGTTGATAGCTCAGTTAGCAGCATCAGCACTCATTACGCTGAAAGTAAATTGACTATTGGTACTAGTAGAGATCAACCAACAGCTCCGGTAGTCTCTTCTACAACCACAAGTAATGCAGAAAGTAATTCATCCACCTCCAAACTTGAAGAGGAGCTTAAAGTTGCTTCCAGGCTGCGAAAGTTCTCATTTAATGATCTTAAGTTGGCAACAAGAAACTTCCGGCCTGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTATTCAAGGGATGGATTGAAGAAAATGGAACTGCTCCAGTGAAACCTGGCACAGGGCTTACAGTTGCTGTAAAAACCCTCAATCATGATGGGCTTCAGGGTCATAAAGAATGGCTGGCTGAAGTAAGTTTTCTTGGCGATCTAATTCATCCCAACCTAGTTAAACTTATAGGCTACTGTATTGAAGATGATCAAAGGTTGCTAGTTTATGAATTCATGCCTCGGGGAAGCCTTGAGAACCACCTATTTAGGAGATCCCTGCCACTTCCGTGGTCCATCAGAATGAAAATTGCACTAGGAGCTGCAAAGGGTCTGGCATTTCTTCATGAGGAAGCTGAACGACCAGTAATATATAGGGATTTTAAAACTTCCAATATACTGTTGGATGCTGAGTACAATGCCAAACTTTCGGATTTTGGACTCGCCAAAGATGGTCCGGAGGGTGATAAAACCCATGTATCCACCCGGGTGATGGGAACCTATGGTTACGCAGCACCAGAATATGTCATGACAGGTCATCTTACATCAAAAAGCGATGTGTATAGTTTTGGAGTGGTTCTTCTAGAGATGTTGACTGGCAGAAGATCAATGGACAAAAACCGACCCAATGGTGAACATAACCTTGTTGAATGGGCTCGGCCACATCTTGGAGAGAGAAGAAGGTTCTATAGGTTGATAGATCCTCGGTTAGAAGGTCACTTTTCTATAAAAGGAGCTCAAAAAGCTGCCCAACTGGCTGCTCACTGCCTTAGCAGAGATCCAAAAGCCAGACCCTTAATGAGTGAAGTTGTAGAAGCTCTAAAGCCTCTGCCAAACCTTAAGGACATGGCGAGCTCATCATATTATTTTCAGACGATGCAAGCCGACCGATTTAGTGCCAGCCCTAATACTCGAAATGGGCGAACACTGCTTTCCCGGAATGGGCAGCAGCAGAGGAGCCTTTCTATACCTCATGGTACTCATGCATCTCCTTATCACCACCAGTTTCCCCTACAATCCCCTAAACCTAATGGCAAAGCATAG 1443 0.4477 MGLGADNDKVESWDSSKSKGKKKKKKDDGVVEEEETGCWVGLRFIGSCITSRSKVDSSVSSISTHYAESKLTIGTSRDQPTAPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVSFLGDLIHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFSASPNTRNGRTLLSRNGQQQRSLSIPHGTHASPYHHQFPLQSPKPNGKA 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0850 480 MobiDBLite consensus disorder prediction 1 30 - -
Lele54g0850 480 ProSitePatterns Protein kinases ATP-binding region signature. 133 165 IPR017441 GO:0005524
Lele54g0850 480 FunFam Probable serine/threonine-protein kinase PBL8 213 428 - -
Lele54g0850 480 CDD STKc_IRAK 133 410 - -
Lele54g0850 480 MobiDBLite consensus disorder prediction 73 99 - -
Lele54g0850 480 Pfam Protein tyrosine and serine/threonine kinase 131 407 IPR001245 GO:0004672|GO:0006468
Lele54g0850 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Lele54g0850 480 Gene3D Phosphorylase Kinase; domain 1 86 212 - -
Lele54g0850 480 Gene3D Transferase(Phosphotransferase) domain 1 213 429 - -
Lele54g0850 480 MobiDBLite consensus disorder prediction 432 480 - -
Lele54g0850 480 MobiDBLite consensus disorder prediction 73 102 - -
Lele54g0850 480 FunFam Serine/threonine-protein kinase BIK1 94 212 - -
Lele54g0850 480 PANTHER OS01G0588500 PROTEIN-RELATED 91 410 - -
Lele54g0850 480 MobiDBLite consensus disorder prediction 432 458 - -
Lele54g0850 480 SUPERFAMILY Protein kinase-like (PK-like) 113 432 IPR011009 -
Lele54g0850 480 ProSiteProfiles Protein kinase domain profile. 127 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0850 Lele-ChrLele54 15127245 15130837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0850 96 407 Glycoside Hydrolase AT3G07070 56.782 7.96e-119 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele54g0850 PK_Tyr_Ser-Thr 2.5e-46 CL0016