Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0847 ATGGAGGTAGCCTCAGTGAAATGTGAACTGAGCCCAACAAGCCATAGGTCTTACATGATGACGGATGGTGGTGACAGTGATGTTAGTAAGTGTGGCAAAAGAAGGCGAAGAGATTCTTCTTTGGCCATCTTAGAAGCCAATGAACAGCCACAAGAACAGCAGCCACAGGGCAACCGATCCAATACCCCCACCACTGTAAAGAGAAGCTCGAGGTTTCGGGGAGTTAGCAGACATAGGTGGAGAGGAAGGTATGAGGATCACCTATGGGATAAAGGAACATGGAATCCAACTCAGAAGAAGAAAGGGAAGCAAGGGGCTTATACTGATGGAGAAGCGGCTGCTAGAGCTTATGATTTGGCTACACTAAAGTACTGGGGAACTTCAAGTTTCACAAATTTCCCTGAGAAGCAGCGGTTTTTCTATAGGTTTATCAAAGTACAGGGGAGTAGCAAGCCACCATCACAACGGCAGATGGGAAGCAAGGATAGGGAGAGTATTTGGCAACAGCCTCCAATAATATCAACCTCTCAACCTAAATGTATTCATTCATATGGAGGTAAACAAGAAGAGGCTGCTCACGCATACGACATCGCAGCAACTGAGTACGGAGACATAAATGCAGTGACAAATTTTGACTTGAGCACATTCATTAGATGGCTAAGACCTGAAGCACCTTCTTCTTCTTTGCTAGTGGGAAATCCAAGCAAAGATCCTCAGAACATGACAACCTCAAACCTTGTCCAAACAGAAGCAACCACTGAGGTATCCAACTTCATCCTCAATCCATTCCCAGCTGGTGATTCTGCAGACAGTACAAAGAAGCAAGGAAGCTCACAATACATGAGCTCTCAAAGTGCTTGCAATTATAACAAGCCATCTTCCCCAACAGCACTAGGGATTCTCATGAAATCCTTAGTAGTTCGTGAGCTGATGCAGAAGGATCTGAATTCTGCTAATGAAGAATCAGAAGAGAGTGAATTGAAAATCCCACAAGAAGGCAGTGATGGGTTTGGAGTGGCTTTTGATCATGAAATTGCAAGTAACTCTTATGCCCTTCCAATAAGAATAGCAGATTTTGCATGGAGTCACCAGAAGAAAGCACGTGGCCATGGTATCATAGAACCACGCAATCCTCCCCATGGAGTGGTGCTTTAA 1155 0.4476 MEVASVKCELSPTSHRSYMMTDGGDSDVSKCGKRRRRDSSLAILEANEQPQEQQPQGNRSNTPTTVKRSSRFRGVSRHRWRGRYEDHLWDKGTWNPTQKKKGKQGAYTDGEAAARAYDLATLKYWGTSSFTNFPEKQRFFYRFIKVQGSSKPPSQRQMGSKDRESIWQQPPIISTSQPKCIHSYGGKQEEAAHAYDIAATEYGDINAVTNFDLSTFIRWLRPEAPSSSLLVGNPSKDPQNMTTSNLVQTEATTEVSNFILNPFPAGDSADSTKKQGSSQYMSSQSACNYNKPSSPTALGILMKSLVVRELMQKDLNSANEESEESELKIPQEGSDGFGVAFDHEIASNSYALPIRIADFAWSHQKKARGHGIIEPRNPPHGVVL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0847 384 MobiDBLite consensus disorder prediction 44 70 - -
Lele54g0847 384 SUPERFAMILY DNA-binding domain 70 135 IPR016177 GO:0003677
Lele54g0847 384 Coils Coil 308 328 - -
Lele54g0847 384 Gene3D AP2/ERF domain 70 136 IPR036955 GO:0003700|GO:0006355
Lele54g0847 384 ProSiteProfiles AP2/ERF domain profile. 71 134 IPR001471 GO:0003700|GO:0006355
Lele54g0847 384 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 50 279 - -
Lele54g0847 384 MobiDBLite consensus disorder prediction 27 42 - -
Lele54g0847 384 MobiDBLite consensus disorder prediction 1 75 - -
Lele54g0847 384 SMART rav1_2 71 140 IPR001471 GO:0003700|GO:0006355
Lele54g0847 384 MobiDBLite consensus disorder prediction 268 288 - -
Lele54g0847 384 CDD AP2 70 135 IPR001471 GO:0003700|GO:0006355
Lele54g0847 384 MobiDBLite consensus disorder prediction 264 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0847 Lele-ChrLele54 15098785 15101546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0847 23 216 AP2-EREBP Transcription Factor Family AT5G57390 37.559 3.79e-28 112