Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0841 ATGGGAAAGACTCCTGGAAAATGGATCAAGGCCTTACTTTCGGGGAAGAAATCAAAGTCTCATTCATCAAAAATGAAAGATTCCTTTAAGCCTTTAAGTACCAAGGATTTGCTGGCAGTGTCCTCTGAAACACATGTGTCTGATCCAATTGCGGTTCCTACAAGGATATCCCAACCCACTTCTGGAGCTACTGCAACTAAGGAATTAGTTTCTGAAAAGGGCCTAGTCAGTGAATTGTCAAATGACAGGGTTGTTATCTCAGCTAGAGATGAAGAGACCAGTGCGCAAGCTGTGGTTGGTTTTGGTTCACAGGATGATCCTGAGAAAATCAGGCTTAACCAAGCTGCTGTAAAAGCACAGGCTGCTTTTAGGGGCTATCAGGCTCGGCGGGAATTTCAAACACTCAAAGGTATCATACAGTTGCAAGCCCATATTCGTGGCAACTTGGTCAGGAAACAAGCAGTTGCTACTTTATACTGTGTGAATGGAATAGTTAAATTTCAAGCATTGGTTCGTGGTAACAAGGTTAGGCGTTCTGATATTGGTCTTGCAGTGCATAAAAGTTGCAAGGGTACTAAATGTTTAATTGCTGTTGGAGGATCAACATCTACACAGACAGATAAGCGGTCCAAAAGTGTCTTTGTTAACAAGCTTCTGGCTTCATCATCCTCTGTCTCTCCTCTGTGTATCAACTATGATCCTGAACAAAGTAATTCAGCTTCAGATTGGTTTGACCGTTGGACAAGTTCCCTCTTCTGGGCACCTCTTCTGAGTCTGGAGTCAAAAACAACACATGACTCAGTGTCTAATGAGAAAAATTACAACAGTCAAACAGTTGAAAAGAATGGCGGCCAAGTTAAAAGAAATGCCCGGAGAAGTTCTGGTGTAAAAGCTAATGATGGTTCAACCTCGGGTTCAAACAAAAATAAACACCGTCCAAAAAAGGTTTCAGCTCACCCATTGCATGCAGGCCAAGAAAATACACAGAAGGACGTTGAGAAAAGTAATTTAAGAAAACCACTCAAGCAGAGTGTTTCTGATAGATCTGAGATTGTTAATGGAAAAGGAAAAGACATACCAAGAAAAGTATCTGGTCATACTGTCACTGATGTTTCAGAGAATGGACCAAATGTTTCTGCAGAAAAAATTAAAGATTCAGCTGTGTCAAAATCCAAACATTCCGATCATGAGCAAAGCCTCGTACAACAAGCAGAAGATGAACATGATTCTCCCATAGCTAACTTGCCATCTGGATTGAAGAACAGTAATGATGACGGTATTCAAGGAGTCAATGAGGACTCGAACTGCACTGATAGTGTGAGCCCTAAGAATTGCAAGAGAAGAGCTTCACTGCCTGCTATGTTTGACAGTCAAGATGATGGTGTGCAAAAAACTCCAAGACTGCCCAGCTACATGGCCCCTACTGAATCTGCAAAAGCTAGGGTAAGAGGACAAGGCTCCCCTAGGCTTGTTACTGACTTGATAGATAAAAATGGTCCAACCCGACGGCATTCGCTTTCATCTTCAGTCAATGGCAAGTTAGGTTCATTTTCTCCACGAGCAGAAAGACTGGGAGCTTTGAGCAGCAAGGGAGTAATAAGAACTGATAAATCTCTGTCATCTTCAAAGGATGGGAGTGAGAAGTTGATCCAACCTCAGTGGAGAAGGTGA 1671 0.4237 MGKTPGKWIKALLSGKKSKSHSSKMKDSFKPLSTKDLLAVSSETHVSDPIAVPTRISQPTSGATATKELVSEKGLVSELSNDRVVISARDEETSAQAVVGFGSQDDPEKIRLNQAAVKAQAAFRGYQARREFQTLKGIIQLQAHIRGNLVRKQAVATLYCVNGIVKFQALVRGNKVRRSDIGLAVHKSCKGTKCLIAVGGSTSTQTDKRSKSVFVNKLLASSSSVSPLCINYDPEQSNSASDWFDRWTSSLFWAPLLSLESKTTHDSVSNEKNYNSQTVEKNGGQVKRNARRSSGVKANDGSTSGSNKNKHRPKKVSAHPLHAGQENTQKDVEKSNLRKPLKQSVSDRSEIVNGKGKDIPRKVSGHTVTDVSENGPNVSAEKIKDSAVSKSKHSDHEQSLVQQAEDEHDSPIANLPSGLKNSNDDGIQGVNEDSNCTDSVSPKNCKRRASLPAMFDSQDDGVQKTPRLPSYMAPTESAKARVRGQGSPRLVTDLIDKNGPTRRHSLSSSVNGKLGSFSPRAERLGALSSKGVIRTDKSLSSSKDGSEKLIQPQWRR 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0841 556 MobiDBLite consensus disorder prediction 415 444 - -
Lele54g0841 556 Pfam Protein of unknown function (DUF4005) 457 532 IPR025064 -
Lele54g0841 556 PANTHER IQ-DOMAIN 5-RELATED 1 511 - -
Lele54g0841 556 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Lele54g0841 556 MobiDBLite consensus disorder prediction 533 548 - -
Lele54g0841 556 MobiDBLite consensus disorder prediction 326 364 - -
Lele54g0841 556 Gene3D - 111 181 - -
Lele54g0841 556 SMART iq_5 111 133 IPR000048 GO:0005515
Lele54g0841 556 SMART iq_5 134 155 IPR000048 GO:0005515
Lele54g0841 556 MobiDBLite consensus disorder prediction 264 556 - -
Lele54g0841 556 Pfam IQ calmodulin-binding motif 136 153 IPR000048 GO:0005515
Lele54g0841 556 Pfam IQ calmodulin-binding motif 114 133 IPR000048 GO:0005515
Lele54g0841 556 Pfam IQ calmodulin-binding motif 164 178 IPR000048 GO:0005515
Lele54g0841 556 MobiDBLite consensus disorder prediction 501 515 - -
Lele54g0841 556 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Lele54g0841 556 MobiDBLite consensus disorder prediction 264 284 - -
Lele54g0841 556 MobiDBLite consensus disorder prediction 385 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0841 Lele-ChrLele54 15051685 15054988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0841 1 556 IQD Protein Family AT1G14380 37.919 2.67e-89 284