Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0839 ATGTTGTCTCAGACCTATAAATACGACATGTTGGTGTATGTTTTCCTTACCAACAAGTCCTCGAAAACCCTAAGAAATCAGGTGCAAGAAGACATGCCCACGTGGGAAGACCATGGATTCTCAATGAAGAGAAGAATCTGTTTGTTGTTTCAAACAATCAGAGGAAGGAGGAAGAGAGACGAGAAGAAGAGATATATAGGTGATCCGAGTGATTTGCATGCTCTGAAAGTGGACAAGGGAATAAGATTTAAAACTCGTAAGCTCAAGAAGTTCTCTTGCAAAGTCTTGGAAGCTGCCACACGCAGAATCAGAAAACTTGGATCACTAGGACACGAAGAATGGCAGAATGAAGTGATATATTTGAGCAAAATTAGCCATCCGAACGTGGTGAATCTCATAGGGTATTGCACTGAGGGTCAGCATAGAATGCTTGTGATTGAGTACATGATTGAAGGAAGCTTGGAGGACCATCTCTCCAAAGAAGACAGAGAAAAGCTAAACGGGAACAGAAGAATTAGCATAGCACTTGGGGCTGCAAGGGGTTTAGAGTATCTTCACATATATGAAACACCAGTAATTCATCGTGATGTTAAATCTTCAAATATCCTGCTAGATGCTAACTTCAATGCAAAGCTCTCTGACTTTGGACCGGCTAGAGATGGACCTGAAGATGATCAGTCCCATGTATCCACAAGAATCCTTGGCACTAGAGGCTATTTTGCCCGGCATTTAACTCTGAAAGCTAATGTTTATAGCTTTGGAGCGGTTCTGCTAGAGATATTATGCTCTGGTGCAGTTAGGAAACATTCAGATGGGGGACAAAGCCCAACAATGGCTGAATTTGTGGCTGCCTTGGAACAGATAGAACTAAACTTAGACTTTCGTCATAAGAGAATGTATAGTAGAACCAAAACTCATTCTTATTCTCACTCTTAA 936 0.4145 MLSQTYKYDMLVYVFLTNKSSKTLRNQVQEDMPTWEDHGFSMKRRICLLFQTIRGRRKRDEKKRYIGDPSDLHALKVDKGIRFKTRKLKKFSCKVLEAATRRIRKLGSLGHEEWQNEVIYLSKISHPNVVNLIGYCTEGQHRMLVIEYMIEGSLEDHLSKEDREKLNGNRRISIALGAARGLEYLHIYETPVIHRDVKSSNILLDANFNAKLSDFGPARDGPEDDQSHVSTRILGTRGYFARHLTLKANVYSFGAVLLEILCSGAVRKHSDGGQSPTMAEFVAALEQIELNLDFRHKRMYSRTKTHSYSHS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0839 311 SMART serkin_6 83 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0839 311 FunFam Os07g0541700 protein 149 236 - -
Lele54g0839 311 Gene3D Transferase(Phosphotransferase) domain 1 150 307 - -
Lele54g0839 311 Pfam Protein tyrosine and serine/threonine kinase 111 266 IPR001245 GO:0004672|GO:0006468
Lele54g0839 311 PANTHER OS01G0588500 PROTEIN-RELATED 97 273 - -
Lele54g0839 311 Gene3D Phosphorylase Kinase; domain 1 87 149 - -
Lele54g0839 311 ProSiteProfiles Protein kinase domain profile. 60 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0839 311 SUPERFAMILY Protein kinase-like (PK-like) 98 265 IPR011009 -
Lele54g0839 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0839 Lele-ChrLele54 15027959 15032845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0839 99 261 Glycoside Hydrolase AT3G07070 52.907 3.76e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele54g0839 PK_Tyr_Ser-Thr 6.2e-33 CL0016