Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0838 ATGGGTAACTGCCTAGATTCTTCTGCCAAAGTAGATACAGCTCAAAGTTCCCGAACTTCTGGATCTGGAATTTCAAAAACTAGCCCTTCATCTGCACCTTCCACCTTGTCAATTCCATCATACAGTGAAAAGAGCAATGCTTCAAGTCTTCCCACACCAAGGTCTGAGGGTGAAATCTTGTCTTCTCCGAACCTAAAGGCCTTTACATTCAGTGACCTAAAGAATGCCACCAGAAATTTTCGTCCCGATAGTCTTCTTGGCGAAGGGGGATTTGGCTATGTTTACAAGGGATGGATTGATGAAAACACGTTCCAGGCTGCAAGACCTGGATCAGGGATGGTTGTTGCTGTGAAAAGGCTAAAACCTGAAGGCAGCTTTCAAGGTCACAAGGAGTGGTTGACTGAAGTTAACTACCTTGGGCAACTTCATCATGTAAATCTGGTTAAATTAATTGGGTACTGCTTGGAGGGAGAGAACCGGTTATTGGTCTATGAGTTTATGCCCAAAGGGAGCTTAGAAAATCATCTATTTAGAAGAGGGCCTCAACCACTCTCTTGGTCGGTGAGGATGAAAGTGGCCATTGGGGCTGCCAGAGGGCTCTCTTTTCTCCATAATGCCAAATCGCAAGTCATATACCGTGATTTCAAAGCTTCCAACATCCTACTAGACGCTGACTTCAATGCTAAACTCTCTGATTTTGGCCTAGCTAAGGCGGGTCCTACTGGCGATAAAACTCATGTGTCTACTCAAGTTATGGGTACTCATGGATATGCAGCTCCTGAATATGTTGCTACAGGTCGGTTGACAGCCAAGAGTGATGTCTATAGTTTTGGGGTTGTGTTGCTTGAACTTCTATCCGGACGGCGTGCAGTTGATAGATCGAAAGCTGGTGTGGAGTTAAATCTGGTAGATTGGGCAAAACCATATTTGGGAGACAAACGAAAACTTTTTCGGATTATGGACACCAAGTTGGAGGGCCAATACCCTCAAAAAGGAGCCTACACAGCTGCAACTCTTGCCCTACAATGCCTGAATAATGAAGCCAAGGCAAGGCCTCCGATGACTCAGGTCTTAGCGACACTCGAACAGATTGAAGCCCCCAAGAACGCAGGCCGACACTCCCACTCAGAGCCACAGAGATCCCACGTTCCTCCTATAAGAGGCTCTCCTGCACGAACCCGGTCCCCACTACATTTGACTCCAACTGCATCCCCATTGCCATCTCACCGGCAAACTGCTTGTGTACACTGA 1251 0.4684 MGNCLDSSAKVDTAQSSRTSGSGISKTSPSSAPSTLSIPSYSEKSNASSLPTPRSEGEILSSPNLKAFTFSDLKNATRNFRPDSLLGEGGFGYVYKGWIDENTFQAARPGSGMVVAVKRLKPEGSFQGHKEWLTEVNYLGQLHHVNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAIGAARGLSFLHNAKSQVIYRDFKASNILLDADFNAKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRSKAGVELNLVDWAKPYLGDKRKLFRIMDTKLEGQYPQKGAYTAATLALQCLNNEAKARPPMTQVLATLEQIEAPKNAGRHSHSEPQRSHVPPIRGSPARTRSPLHLTPTASPLPSHRQTACVH 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0838 416 FunFam Serine/threonine-protein kinase BIK1 47 166 - -
Lele54g0838 416 MobiDBLite consensus disorder prediction 1 58 - -
Lele54g0838 416 MobiDBLite consensus disorder prediction 368 416 - -
Lele54g0838 416 FunFam Probable serine/threonine-protein kinase PBL8 167 381 - -
Lele54g0838 416 ProSitePatterns Protein kinases ATP-binding region signature. 86 118 IPR017441 GO:0005524
Lele54g0838 416 Gene3D Phosphorylase Kinase; domain 1 56 166 - -
Lele54g0838 416 PANTHER OS01G0588500 PROTEIN-RELATED 42 365 - -
Lele54g0838 416 SUPERFAMILY Protein kinase-like (PK-like) 51 361 IPR011009 -
Lele54g0838 416 Pfam Protein tyrosine and serine/threonine kinase 84 360 IPR001245 GO:0004672|GO:0006468
Lele54g0838 416 CDD STKc_IRAK 86 364 - -
Lele54g0838 416 ProSiteProfiles Protein kinase domain profile. 80 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele54g0838 416 MobiDBLite consensus disorder prediction 395 416 - -
Lele54g0838 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 210 222 IPR008271 GO:0004672|GO:0006468
Lele54g0838 416 Gene3D Transferase(Phosphotransferase) domain 1 167 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0838 Lele-ChrLele54 15024911 15027646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0838 12 361 Glycoside Hydrolase AT3G07070 47.592 6.56e-109 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele54g0838 PK_Tyr_Ser-Thr 1.8e-47 CL0016