Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0836 ATGAGGAAGCTGAAGCAGCAGCAGCAGCAACAGGAGCTGGGTAAGGAAGAAGAATCTCAGAAGAAGGAGCGTCATATTGTGACGTGGACACAAGAGGAAGATGATATTTTGAGGAAGCAGATAAGCATCCATGGAACTGAGAATTGGGCAATCATTGCATCTAACTTCAAAGACAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTACTTGAACTCCGATTTCAAGAAAGGAGGATGGTCACCGGAGGAAGACTTGCTCTTATGTGAGGCTCAGAAAATATTTGGTAACAGGTGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAACGCTGTGAAAAACCGTTTCTCCACTCTGTGCAAGAAGAGAGCGAAATTTGAAGCCTTGGCAAAAGAGAACAACACTTCATTCACTAATTCAATCAACAAAACAACTATTTTCCAACAGGGTGACAGCAGAGAATCAACATCAGTTGCTGCGCCGCCTGCTAAGAAGATGAGGAGAGCCCATATCCCTGATGCTGCAGAAAGGATCAACTATGGAGACAGATCCCATAAGCAATATGAAGCAGCAATAAAACAACAGCCAAGAGCGCCATTTTCGATTTTGGCTCAGAACTTGCCAAATCAGCATGAAGCCTCCAATGACAAGATCAGCACTAATGGTAATGTGTTTAAATTGGTTGTGGAACTTATTCTTGCTATTGTGATACCTGAAATGGAAGATCATAAAGGATTAGTGTCCCATAATTCCAAGACTCAAGGAACATTTCTTAAAGAGGATGATCCAAAGATAAGTCTGTTGATGCAACAATCAGAGTTATTAAGTTCACTAGCTCTAAAAGTTAATACAGATGACGTGGACCAGAGTCTTGAAGATGCATGGAAGGTGCTTCAAGAGTTTCTGAACCAAACCAAAGAATCAGATATTCTCAAATATAAGATTTCGGATTTACAGCTTGTAGATCTTAAATATATGATGGAGGAATTCAAGAGTAGTAATGAGGGGAGCCAACAATGTTGGAGGCAACCAGAACTATATGAAGACTCTCCAAGCAGTTCTGAATACAGTACAGGATCAACTCTTCTGCCCCATTCAGCAAGTGATAATCTGGAACACTCTCAGCTTCAGGATATTGGAACTGATCCAAAGACTATCCAACTTGGAGATCAAAAAGGAGTAAGTGAATGTGGGAAAGAGGATTTCTCTTCTGCAACTATTGGTCAAGTGGCAGATATCTTCCCATCTTGTGAGGAACAGATAAGCAATGATGGCATTGCTTCTACCTCATCAAGCACAGAGTTCAATTCCCCTCTTCAAGTTACCCCTATGTTCAGATCTTTGGCTGCAGGAATTCCTAGCCCACAGTTTTCAGAAAGTGAAAGGAACTTCCTAATGAAAACGCTTGGATTGGAGTCTCCAAGTGCCAACCCCTCACAACCACCACCCTGCAAAAGAGCCCTACTACACAGTCTATAA 1488 0.4194 MRKLKQQQQQQELGKEEESQKKERHIVTWTQEEDDILRKQISIHGTENWAIIASNFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDLLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKFEALAKENNTSFTNSINKTTIFQQGDSRESTSVAAPPAKKMRRAHIPDAAERINYGDRSHKQYEAAIKQQPRAPFSILAQNLPNQHEASNDKISTNGNVFKLVVELILAIVIPEMEDHKGLVSHNSKTQGTFLKEDDPKISLLMQQSELLSSLALKVNTDDVDQSLEDAWKVLQEFLNQTKESDILKYKISDLQLVDLKYMMEEFKSSNEGSQQCWRQPELYEDSPSSSEYSTGSTLLPHSASDNLEHSQLQDIGTDPKTIQLGDQKGVSECGKEDFSSATIGQVADIFPSCEEQISNDGIASTSSSTEFNSPLQVTPMFRSLAAGIPSPQFSESERNFLMKTLGLESPSANPSQPPPCKRALLHSL 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0836 495 MobiDBLite consensus disorder prediction 337 370 - -
Lele54g0836 495 CDD SANT 81 122 IPR001005 -
Lele54g0836 495 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 72 IPR017930 -
Lele54g0836 495 SUPERFAMILY Homeodomain-like 25 119 IPR009057 -
Lele54g0836 495 FunFam Transcription factor MYB124 21 77 - -
Lele54g0836 495 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Lele54g0836 495 Pfam Myb-like DNA-binding domain 29 88 - -
Lele54g0836 495 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Lele54g0836 495 Gene3D - 18 77 - -
Lele54g0836 495 MobiDBLite consensus disorder prediction 1 24 - -
Lele54g0836 495 Gene3D - 80 150 - -
Lele54g0836 495 PANTHER MYB PROTEIN-RELATED 28 195 - -
Lele54g0836 495 CDD SANT 28 72 IPR001005 -
Lele54g0836 495 SMART sant 25 74 IPR001005 -
Lele54g0836 495 SMART sant 77 125 IPR001005 -
Lele54g0836 495 Coils Coil 1 21 - -
Lele54g0836 495 ProSiteProfiles Myb-like domain profile. 29 72 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0836 Lele-ChrLele54 15007312 15011901 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0836 67 495 MYB Transcription Factor Family AT1G14350 48.975 1.19e-127 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele54g0836 Myb_DNA-bind_6 5.3e-15 CL0123