Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0831 ATGTCTAGCAGAAGATCTCGTTCCACAGAGATCAGTGATGCTCAGATCAACGATCTCGTCTCCAATTTACAACGCCTCATTCCCGAGCTTCAAGCCCCTCGCTCCCACCACAAGGTATCGGCGGCGAAGGTGTTGAAGGAGACATGCAACCGCATAAAGAAGTTGCAGAGAGAAGTGGATGATCTGAGTGACAGATTATCAGAGCTTTTGGCCACTACTGACTCCGACACTGCTGAAGCTACCATTCTTAGGAGCTTACTTATGTAG 267 0.4869 MSSRRSRSTEISDAQINDLVSNLQRLIPELQAPRSHHKVSAAKVLKETCNRIKKLQREVDDLSDRLSELLATTDSDTAEATILRSLLM 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0831 88 Pfam Helix-loop-helix DNA-binding domain 15 56 IPR011598 GO:0046983
Lele54g0831 88 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 15 73 IPR036638 GO:0046983
Lele54g0831 88 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 55 IPR011598 GO:0046983
Lele54g0831 88 PANTHER TRANSCRIPTION FACTOR PRE 1 88 IPR044293 GO:0006355|GO:0040008|GO:0046983
Lele54g0831 88 Coils Coil 45 72 - -
Lele54g0831 88 Gene3D - 5 84 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0831 Lele-ChrLele54 14968019 14968362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0831 1 88 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47710 58.065 1.05e-27 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele54g0831 HLH 1.5e-05 No_clan