Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0826 ATGGTGCATGTCTCATTCTATAGAAACTATGGGAAAACCTTCAAGAAGCCTCGTCGTCCCTATGAGAAGGAGCGTCTAGATCACGAGCTCAGGCTTGTCGGGGAGTACGGCCTTCGTTGCAAGAGGGAGTTGTGGAGGGTTCAGTATGCTCTCAGCCGGATACGTAATGCGGCTAGAATGCTTCTCACGCTCTATGAGAAGAATTCTCGTCGTATCTTCGAAGGTGAAGCTCTTCTTCGGAGGATGAACAGGCAGATGGTCTTAGTATCTAACATGTACATTAGATATGCTAAAGGAAGGAAGGCAGGCGGTGAATATTCCCTCGTTTATGGTGGGAGTAGACTCACAAAACACATTGACTTCTCATTAACAAGTCCATTTGGTGGTGGACGTCCTGGAAGAGTGAAGCGAAAGAACCAGCGGGCAGCTGCTAAGAAAGCTGCTGGCGATGAGGAAGATGAAGAAAATACGAGTGTGGATCACATAGGGCTGTCAAGTAATTCTCTTGAGGCAAGAGTTTCAATAGCGACCTTCTTCACCCCTGGGGCTGCAGATAATGTGTACGGACCTCTGGAGGAGCTGACGTCAGCAGGGGACCCACCTCGTTATCGACGTGTCACCTACAAGGAGGACATGCACAAGTTCTTCAACAAGGAAGTGGATAACAAGTCTCAGACTGATTACTTTAGGATATAA 696 0.4784 MVHVSFYRNYGKTFKKPRRPYEKERLDHELRLVGEYGLRCKRELWRVQYALSRIRNAARMLLTLYEKNSRRIFEGEALLRRMNRQMVLVSNMYIRYAKGRKAGGEYSLVYGGSRLTKHIDFSLTSPFGGGRPGRVKRKNQRAAAKKAAGDEEDEENTSVDHIGLSSNSLEARVSIATFFTPGAADNVYGPLEELTSAGDPPRYRRVTYKEDMHKFFNKEVDNKSQTDYFRI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0826 231 PANTHER 30S 40S RIBOSOMAL PROTEIN 8 96 IPR022801 GO:0003735|GO:0015935|GO:0019843
Lele54g0826 231 Pfam Ribosomal protein S4/S9 N-terminal domain 8 84 IPR001912 GO:0019843
Lele54g0826 231 SUPERFAMILY Clavaminate synthase-like 169 222 - -
Lele54g0826 231 MobiDBLite consensus disorder prediction 130 160 - -
Lele54g0826 231 SUPERFAMILY Alpha-L RNA-binding motif 12 89 - -
Lele54g0826 231 SMART Ribosomal_S4_2 8 83 IPR001912 GO:0019843
Lele54g0826 231 Gene3D - 154 229 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0826 Lele-ChrLele54 14907498 14910076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0826 1 148 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 59.893 3.08e-62 191