LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele54g0823	ATGATCATGGAGGAGGCAGATCATCATTCTAATGGGATCCGCAGACCCAATTTCCCACTGCAGCTGTTGGAGAAGAAAAATGGTGAACAGAGACAGCAGGGTGATGATGATGATGCAGCTGCAGTGAAAGTTGCTTTTGTTGACCCGAACCGACCCGATAGTAACCTCCAGCTCGCCGACCAATCGAAGAAGCCGCCTCCGAAGAGAACCTCCACGAAGGACAGGCACACCAAGGTGGAAGGTCGGGGCCGTCGGATCCGCATGCCGGCAGCTTGTGCTGCTAGAGTTTTTCAGCTGACTAGGGAGCTTGGCCATAAGTCCGATGGCGAGACCATCGAGTGGCTGCTCCAGCAGGCGGAACCCGCCGTGATCGCCGCCACCGGGACTGGGACCATTCCCGCCAATTTCACTTCGCTTAACATCTCGCTCCGCAGCTCCGGCTCGACTGTGTCGGCGCCATCGCAATACTTCAGGGGCAATAGTTATAGTAATTACTTCAGTCCCAGCTTGTTTTCTTCATCGTTGCAGTTGAGAAACACGGTCGTGGATGATTCCAGAAGGATCTTGTTCCCCGGGGGCGGCGCCGTTGGGTTTTCTTCTTCCTCTCCCTCCGAGAATTCTTCGATGAATAATTTCATTTCTGCGAGCAATGTGAATGCCATGTTACAACTATCAAAGCAAGAGCTCAGGGAAGAAACTGGCGGCGGCGGAGGTGGCGGCCTTGAATCAACGACAACAGAAACGGAAGGAAGTTTAGGGAAAAAGAGACGGTCACCAGAACAGGAACTACCACAGAGTCAGATGGGAAATTATTTGTTACAATCCAGCACAGGCTCAATTTCGGCAAGTCATTCCTCGGTTCCGGCGACGTTTTGGATGGTAAGTAGCCCCGCCGGAAACAGCCAACCCATAGGCAGCAGTGGCGGCAACGGCAACGGAAACATCGGAAGCAGTAGTGGTGGTGATCCCATATGGGCAATTCCTTCAGTTGGTAATTATAGTAACATGTATAGAGGAGCCATGTCTAGCAATGGGATTCATTTTATGAATTTTGGTTCTCCAATGGCTCTGATGGGTGGTGGTATGAATGAAAGCAACTTAGGTATGCTTGCAGCCCTAAATGCATACAGGCAGATTCCGGCGAGTGGCGTTTCAGAGTCTCCGGCGATTACTGGGCACGGAGGAGAGCATGGTTATCAGCTAGGGTTTGAGAAGAAACTTACATACATATTTCAACAACTAGCTATTTGCTTTGCTCGAGCTTTGTTCTCTCTTCACAAAGTGATTTAA	1290	0.507	MIMEEADHHSNGIRRPNFPLQLLEKKNGEQRQQGDDDDAAAVKVAFVDPNRPDSNLQLADQSKKPPPKRTSTKDRHTKVEGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTVSAPSQYFRGNSYSNYFSPSLFSSSLQLRNTVVDDSRRILFPGGGAVGFSSSSPSENSSMNNFISASNVNAMLQLSKQELREETGGGGGGGLESTTTETEGSLGKKRRSPEQELPQSQMGNYLLQSSTGSISASHSSVPATFWMVSSPAGNSQPIGSSGGNGNGNIGSSSGGDPIWAIPSVGNYSNMYRGAMSSNGIHFMNFGSPMALMGGGMNESNLGMLAALNAYRQIPASGVSESPAITGHGGEHGYQLGFEKKLTYIFQQLAICFARALFSLHKVI	429

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele54g0823	429	PANTHER	TRANSCRIPTION FACTOR TCP4-RELATED	37	395	IPR005333	GO:0003700
	Lele54g0823	429	MobiDBLite	consensus disorder prediction	28	42	-	-
	Lele54g0823	429	MobiDBLite	consensus disorder prediction	230	267	-	-
	Lele54g0823	429	MobiDBLite	consensus disorder prediction	66	84	-	-
	Lele54g0823	429	Pfam	TCP family transcription factor	70	204	IPR017887	-
	Lele54g0823	429	MobiDBLite	consensus disorder prediction	1	84	-	-
	Lele54g0823	429	ProSiteProfiles	TCP domain profile.	72	126	IPR017887	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele54g0823	Lele-ChrLele54	14874737	14876274	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele54g0823	62	360	TCP Transcription Factor Family	AT3G47620	43.373	4.58e-54	185

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	TCP	Lele54g0823		TCP	9.2e-37	No_clan