Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0810 ATGGGTACCAAGAACCTCTCCCTGCTTAAAACCCACTTTGATTCCGTCAGAGCATGTTTTGCAAATAATATTTTTCCCGGAAACATGCCCTGGGCTCTCACATCTCTCTCAGTTTTCATTGGCAACTCTGTTGTTTACTTGTTTGGGTTGATTCTCCAGTTTATTTTCAGAATTCAAAAAGCAGATGGAAAAAATGAGCTTTTCGCTCAACCTGAGGATTCTCAGATTGAAGGGTTCAGAGAAGAGCTGATTAATTTCCTGTTTCAGAGTAACGAATATGTCCACGATTTCGCAGAAGATGGCATAAAAGAAAGTGAAGATGAAAAAACAGAGAATTCTGTTTCAGAAAAGACAGAGTCGGACAGTTTTGAAGATAGTGAGAGCAGAGAAGAAGAGGAGGAGGGAGAGGAAGAAGAAAAGGAAGAATATTTCTCTGCTTCTATGAGTGAAGCAGGAGAAGAAGAATTTGAAGCTAGCACGAAAATTAACCCAGAATTTTATGATGGTGGAGTGAAAAACGAGAAAGAAGCAGCAGAGAGCCCTTTTACCATGGAGGGAATCTCTGAGGTTCATGAAAATGGTATGAGAAGAGTAGAAGAAGAAACAGAGAGCTCTGGTGCCATGGAGGATGACTCTGTTTATGAAAATAGTAAGAGAAGGGAAGAACATAAAGAAGAAACAGCCATGTCTGCTTTAATGGAGGATGAAGAGATTGAGACAACAGAAGAAGAGAAAGAAGAAACAGGCATGTCTGCTTTAATGGAAGATGAAGAGATTGAGGGAAAAGAAGAAGACGAAGAAACAGAGATGCCTGCTTTAATCAGTAATAAGTTTGAATACGTGTCAGGAGGGGATATTATTGGGTTCGTAGAAGAACCAACAACAACAATGACCTTTAGTTTTCGTGAATTCTTCGTGAGTCCATATGTTTCCGACACAGAAATTTCAGAGAAAGAAAAATCTACCGAAGCGCAGAGTTTTCAAGAATTTCATCCATCTTCAAATGACGCTCAAGTGGAAATTCCAGAGCTTGAATCAGAGCACAAACCATTTTTTCAAGAAGCAGCAGCACAGAAAGAAATTTCAGAGCTCAAATCAGAGGATGAAAAATCCATTGGATCACAGAGTTTTCGCGAATTTCATCCATCACCAAATGGCTCTGAGGTAGAAATTTCAGAGCTTAAATCAGAGCACGAACCAGTTTTTCAAGAAGAATCACAGAAAGAAGCTGATCAAGAGCAGAGTTCTCCAAGTTTTCATCCAAGTTCAAGTGTTTCAGAAGAAGAAAACGAGGGATCAATTCAAGAGCAGAGGATGTTCCATGGCCATTCTAGTTCTGATCAATTTAGCCTAAAAAGTGAGATCTTTCGAGGGAGAGATTCATCTGATGATGATGAAGATGATTTGGATTTCATTGACAATTCAGTTGAGTCTGATTCAGAATCAGAATCATCAAGCTCAAGTGGTCTCATATGGGCCAACAGTGACAAAACTGATGATTTAATCACATACGAGTTTCTATCATACCAAAAATGTTTAGAAGGATTGGAGCCAGAAACCCTCAAGCTGATGCAAAAGCTAAGAGCCATAGATGAATTCATAGAACTAGCACCTGGGAAAGCCGAGAATGAAGATGAAAAGAAAGGTTCAAAAGAAGAAGAAGAAGATGATCTTGAATGGGATGATGATGAATTGGTAGAACAAATGAAAATGGAAATGAGAAATGCAAGACAAGGAGGGCTTCCCACAATTTTAGAGGACGAAGAAGAAGAAGAAGGACAAGAAGTTAATGAGTCCCCAAGAATGGCTGAAGATCTAAGGCCATTGAAGATTGAAGATCAGAAACTGGAATTCAAGGATCATATCAGAGAAATCCAGAAAGTTCACAAGAGTTATGAAGAGAAAATGAGGAAGCTTGATATCTTGAACTACCAAACCATGCATGCTCTAGGTCTACGGCAATTGAAAGAGCCGAGTGAGAAGCCTATGATATTAAAGAATTTATTATTATGGTCAAGAAAAGATCAGAAGAAGTCGTCGGAGGTAGTGGTGAGTTTGGTGGAGGAGTTGGAGGTGGTGTATGTGGGCCAGCTTTGTTTGTCGTGGGAAATTCTGTGTTGGGAGTACAAGAAAGCGATTGAGTTGAAACAGTATGACGGCGAATGGGTTCGCCGGTATAATGTGGTGGCCGGAGAATTTCAACTGTTTCAAGTGCTGTTGCAGAGGCTCATTGAGAGCGAGCCTTTTCAAGGACCTAGGATTCACAATTATGTTAGGAACCGTTGTGTCATTCGGAACCTCCTCCAAGTTCCCACCATTAAAGACGATAGTATGAAGGAGATGACAAAGGATGAAGAAGAAGGTATTTCAAGTGAAAGGTTAGCAGAAATCATCAGAGAATCAATGTACATCTTCTGCAAGTTTGCTCGAGCCGACAAGCACGACATTAACAACAACACCTTCTTCAAACTTCCTCACCAGACCAAACCAACTCATCTCAAAGACCCTTCCACTTGTCATCTTCTTGCTGACATTCAAACCCACCTCCACAAGAAGGAGAAGAGGCTGAAGGACATATTGAGAACTGGGAATTGCATAGTGAGGAAGTTTCAGAAGCAGAGTGAAGATAAAGTGCAGCTTGATCTTGAGCAGATGGTGGCTCAGGTTCAGTTGAAGTTGATATCAAGAATTCTAAGTATGTCAAAGTTGAGAACAGATCAGTTAATTTGGTGTAATGACAAGTTAAATAGGATTACTTTTGTTGACACCAAAGTCCATCGTCTTACATATCGCAAACGTCACAGCTATGCTACCAAATCCAACCAACATAGGGTTGTCAAAACCCCAGGGGGTAAGCTCGTTTATCAGACAACTAAGAAGAGGGCTAGCGGGCCCAAGTGCCCTGTAACAGGCAAGAGGATTCAAGGGATTCCACACTTGAGGCCTGCTGAATACAAGAGGTCAAGGTTACCTAGAAACCGAAGGACTGTGAACCGTGCATATGGTGGAGTTTTGTCTGGAAGTGCTGTCAGAGAAAGGATTATTCGAGCCTTCTTGGTTGAAGAGCAAAAGATTGTGAAAAAGGTGTTGAAGATTCAGAAGGCCAAGGAAAAGCAATCCTTGAAGGGTTAA 3132 0.4087 MGTKNLSLLKTHFDSVRACFANNIFPGNMPWALTSLSVFIGNSVVYLFGLILQFIFRIQKADGKNELFAQPEDSQIEGFREELINFLFQSNEYVHDFAEDGIKESEDEKTENSVSEKTESDSFEDSESREEEEEGEEEEKEEYFSASMSEAGEEEFEASTKINPEFYDGGVKNEKEAAESPFTMEGISEVHENGMRRVEEETESSGAMEDDSVYENSKRREEHKEETAMSALMEDEEIETTEEEKEETGMSALMEDEEIEGKEEDEETEMPALISNKFEYVSGGDIIGFVEEPTTTMTFSFREFFVSPYVSDTEISEKEKSTEAQSFQEFHPSSNDAQVEIPELESEHKPFFQEAAAQKEISELKSEDEKSIGSQSFREFHPSPNGSEVEISELKSEHEPVFQEESQKEADQEQSSPSFHPSSSVSEEENEGSIQEQRMFHGHSSSDQFSLKSEIFRGRDSSDDDEDDLDFIDNSVESDSESESSSSSGLIWANSDKTDDLITYEFLSYQKCLEGLEPETLKLMQKLRAIDEFIELAPGKAENEDEKKGSKEEEEDDLEWDDDELVEQMKMEMRNARQGGLPTILEDEEEEEGQEVNESPRMAEDLRPLKIEDQKLEFKDHIREIQKVHKSYEEKMRKLDILNYQTMHALGLRQLKEPSEKPMILKNLLLWSRKDQKKSSEVVVSLVEELEVVYVGQLCLSWEILCWEYKKAIELKQYDGEWVRRYNVVAGEFQLFQVLLQRLIESEPFQGPRIHNYVRNRCVIRNLLQVPTIKDDSMKEMTKDEEEGISSERLAEIIRESMYIFCKFARADKHDINNNTFFKLPHQTKPTHLKDPSTCHLLADIQTHLHKKEKRLKDILRTGNCIVRKFQKQSEDKVQLDLEQMVAQVQLKLISRILSMSKLRTDQLIWCNDKLNRITFVDTKVHRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQSLKG 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0810 1043 MobiDBLite consensus disorder prediction 478 494 - -
Lele54g0810 1043 ProSitePatterns Ribosomal protein L34e signature. 938 951 IPR018065 -
Lele54g0810 1043 PANTHER OS09G0413600 PROTEIN 242 927 - -
Lele54g0810 1043 Pfam Ribosomal protein L34e 925 1019 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele54g0810 1043 MobiDBLite consensus disorder prediction 102 124 - -
Lele54g0810 1043 MobiDBLite consensus disorder prediction 463 477 - -
Lele54g0810 1043 MobiDBLite consensus disorder prediction 102 269 - -
Lele54g0810 1043 MobiDBLite consensus disorder prediction 437 452 - -
Lele54g0810 1043 MobiDBLite consensus disorder prediction 538 559 - -
Lele54g0810 1043 MobiDBLite consensus disorder prediction 212 231 - -
Lele54g0810 1043 Gene3D - 962 1043 - -
Lele54g0810 1043 PRINTS Ribosomal protein L34 signature 967 977 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele54g0810 1043 PRINTS Ribosomal protein L34 signature 949 966 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele54g0810 1043 PRINTS Ribosomal protein L34 signature 989 1011 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele54g0810 1043 PRINTS Ribosomal protein L34 signature 936 949 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele54g0810 1043 Gene3D - 925 960 - -
Lele54g0810 1043 MobiDBLite consensus disorder prediction 341 375 - -
Lele54g0810 1043 MobiDBLite consensus disorder prediction 412 430 - -
Lele54g0810 1043 MobiDBLite consensus disorder prediction 125 141 - -
Lele54g0810 1043 MobiDBLite consensus disorder prediction 391 411 - -
Lele54g0810 1043 MobiDBLite consensus disorder prediction 316 494 - -
Lele54g0810 1043 Coils Coil 622 642 - -
Lele54g0810 1043 Pfam Protein of unknown function (DUF1666) 689 927 IPR012870 -
Lele54g0810 1043 MobiDBLite consensus disorder prediction 232 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0810 Lele-ChrLele54 14770548 14777423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0810 925 1042 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 90.678 1.08e-64 212