Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele54g0807 | ATGGATGCGGCTGGACCTTCTGGTTCTGCCCCAGCGGTGGATGATGATGCCAGATCTGAACATGATGAGGGTTGTGATGAGGACGAGCCGCTGATCCAGATGGCTGAGTGTCGCATTTGTCAAGAGGAGGATAGCGTTAAGAATTTGGAGACTCCTTGTGCCTGCAGCGGCAGCCTAAAGTTTGCTCACAGAAAGTGTGTTCAACATTGGTGCAATGAAAAGGGAGATATAATTTGTGAGATATGTCATCAGCCTTACGAACCAGGTTATACTGCTCCACCACCTCGTCCCCAACCTGAAGAAACTAGCATTGACATAGGTGGGGGCTGGACAATCTCTGGCACACCTTTGGACTTGCGTGATCCTCGACTGTTGGCAATTGCTGAGGCAGAACGCCAATTCTTGGAAGCTGAGTATGATGAGTATGCTGCTTCTAATGCCAGTGGAGCAGCCTTTTGCCGCTCTGCCGCTCTGATTCTAATGGCTCTGTTACTCTTGCGGCATGCACTTTCAGTTACAGATTCTGATGCTGATGATGATCCATCTACTTTTTTCTCTCTTTTCTTGCTTAGAGCAGCTGGATTTCTTTTACCCTGCTACATCATGGCTTGGGCAATCAGTATTTTGCAACGTCGGCGACAAAGACAAGAGGCGGCAGCATTGGCAGCAACCCAAGTTGCTTTTGTATTACAATCTGGACAGCGTAGGGGTCTGCAATTTGCCATAGCACCAGCTGGGCCCACCCTGAATTCACAACAGGAGCATGTGTAG | 771 | 0.4903 | MDAAGPSGSAPAVDDDARSEHDEGCDEDEPLIQMAECRICQEEDSVKNLETPCACSGSLKFAHRKCVQHWCNEKGDIICEICHQPYEPGYTAPPPRPQPEETSIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLEAEYDEYAASNASGAAFCRSAALILMALLLLRHALSVTDSDADDDPSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFAIAPAGPTLNSQQEHV | 256 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele54g0807 | 256 | Coils | Coil | 125 | 145 | - | - | |
Lele54g0807 | 256 | FunFam | RING/FYVE/PHD zinc finger protein | 25 | 93 | - | - | |
Lele54g0807 | 256 | SMART | ringv_2 | 36 | 83 | IPR011016 | GO:0008270 | |
Lele54g0807 | 256 | SUPERFAMILY | RING/U-box | 35 | 87 | - | - | |
Lele54g0807 | 256 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 15 | 216 | IPR033275 | - | |
Lele54g0807 | 256 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 22 | 91 | IPR013083 | - | |
Lele54g0807 | 256 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 29 | 89 | IPR011016 | GO:0008270 | |
Lele54g0807 | 256 | Pfam | Protein of unknown function (DUF3675) | 88 | 206 | IPR022143 | - | |
Lele54g0807 | 256 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Lele54g0807 | 256 | CDD | RING_CH-C4HC3_MARCH | 37 | 83 | - | - | |
Lele54g0807 | 256 | Pfam | RING-variant domain | 37 | 82 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele54g0807 | Lele-ChrLele54 | 14746265 | 14749087 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele54g0807 | 36 | 82 | C3H Transcription Factor Family | AT2G37950 | 42.000 | 3.11e-06 | 45.1 |