Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0801 ATGACAGAAGCTTGCCCGTCTTCCTTCCCCATTCAGACGCTTGCTGAGATGAGGCTCGAAGTTCATCCTGGAACTCGAACCGTCGTCGTCTCTCCTTCGTTCCTAAAACCCTTTCAAAACCCTAACTTCAATGTCGCAGGACCTCTTTTTACTTCCCTCAACGGATCTCTTCTCTTCAGACCCATTACCCAATATTCCCATCAACCCAACGCCCCTCCTCTTGTACCTTCTCACTCCGACACCGGTCTCCTTTTCCGAGAAAAAGTTATCTACCTCGATAAACTCAACATCAACTCCAGCAAAGCCCTCCGCCAAAATCCTAACATCCGATCGGTTCCAATTTCCACTCTTAAATCTGTACAAGACTGCCTCTCCTCAATGGGCGTCGAACGCTCTGCAATGGGTCGAATCCTCGATATGTATCCCCAACTTCTCACATGCGACCCCTATTTTGATCTCTACCCTGTTTTCGATTTCTTATTGAATGAGGTTGCAATTCCGTTCCCTGATATTCGTAAAGCGATCATACGGTGCCCGAGGCTATTGATTTGCACCGTGGATGAGCAGCTCAGACCGACATTGAGCTTCTTGAGGAATTTAGGGTTTGTGGGACCCAATTCCATCAATTACCAGACCGCATTGCTGCTGGTGTCAAGTGTGGGGGACACCCTTACACCCAAAATTGAGTATTTGCAGGGTCAGGGGTTCTCTTATGAGGAAGTGGTTAATATGGTCATAAGGTCACCTGGATTATTGACGCTTAGTATCATAAACAATTTGATGCCGAAGTTTGAGTATTTTTTGGAGGAGATGAATGGGGACATAGCTCAATTGAAGAGATTTCCGCAGTATTTTTCATTTAGTTTGGAGAAGAAGATTAAGCCAAGGCATAGACTATTACTCAAGCACGGCTTTACGCTTCCTTTGGCCGAAATGTTAAAGGTTAGTGATGGCGAGTTCGGTGTTAGGTTAGTTGAAATGCGACTACAGTCACTTGAGCGAAGGTAG 1008 0.4583 MTEACPSSFPIQTLAEMRLEVHPGTRTVVVSPSFLKPFQNPNFNVAGPLFTSLNGSLLFRPITQYSHQPNAPPLVPSHSDTGLLFREKVIYLDKLNINSSKALRQNPNIRSVPISTLKSVQDCLSSMGVERSAMGRILDMYPQLLTCDPYFDLYPVFDFLLNEVAIPFPDIRKAIIRCPRLLICTVDEQLRPTLSFLRNLGFVGPNSINYQTALLLVSSVGDTLTPKIEYLQGQGFSYEEVVNMVIRSPGLLTLSIINNLMPKFEYFLEEMNGDIAQLKRFPQYFSFSLEKKIKPRHRLLLKHGFTLPLAEMLKVSDGEFGVRLVEMRLQSLERR 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0801 335 SMART mt_12 135 167 IPR003690 GO:0003690|GO:0006355
Lele54g0801 335 SMART mt_12 206 237 IPR003690 GO:0003690|GO:0006355
Lele54g0801 335 SMART mt_12 242 274 IPR003690 GO:0003690|GO:0006355
Lele54g0801 335 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Lele54g0801 335 SMART mt_12 172 203 IPR003690 GO:0003690|GO:0006355
Lele54g0801 335 SMART mt_12 100 130 IPR003690 GO:0003690|GO:0006355
Lele54g0801 335 Pfam mTERF 169 320 IPR003690 GO:0003690|GO:0006355
Lele54g0801 335 Pfam mTERF 123 199 IPR003690 GO:0003690|GO:0006355
Lele54g0801 335 Gene3D Transcription termination factor 3, mitochondrial 98 334 IPR038538 -
Lele54g0801 335 PANTHER CGI-12 PROTEIN-RELATED 96 324 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0801 Lele-ChrLele54 14723420 14724427 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele54g0801 mTERF 7.8e-30 No_clan