Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0800 ATGAAGGCAGCTTGGCGGAACTGCCTTCTATATTCTTCACAACAACACTCCAATAATGCTCTTACCTGTTCTGATCTCTCGTCTTCTTCGATGGGGATGGTTTATGCAGACATGGGTTCTCTTTCTCTTTCTTCTTCTTCTTCTGAAATGGGAAATAATAACAATATTGGGGGAACCAGCTTGGGTAGTACTTTTCCCTTTATTAGGGATCACCTTCCCAACAACAACACTGCCACCACCGATAATATTGGTAATGATGCTTTGGAGTGTAAAGCTTCTGAACCTAGTGCTGATCATGAGAATCTCATAGATCATACCCAAGAAAACCCTAATGAGAATTCTGGTGTCAGTACGGGAAAAGAAGCTGATTCTGACCAGTCCAAGCTTTGTGCACGAGGACATTGGAGACCTGCAGAAGATGCCAAGCTCAAGGAGCTCGTTGCCCTCTATGGCCCTCAGAACTGGAACCTCATAGCGGAAAAATTGGAAGGAAGATCAGGTAAAAGCTGTAGGCTGAGGTGGTTCAACCAGTTGGATCCGAGGATAAACAGGAGAGCATTCAGTGAAGAGGAAGAAGAGAGATTAATGCAGGCACATAGGATATATGGGAACAAATGGGCCATGATTGCAAGGCTGTTTCCAGGAAGAACTGATAACGCAGTGAAGAATCACTGGCATGTTATAATGGCGAGGAAGTACAGAGAACAATCAAGTGCTTACAGAAGGAGAAGATTAAGCCAATCTGCAAGTTACGCAAGATCATCAATGGAGGACCAGAATTCAAGTAGAGGAAGCTCAGGGACGACAGAACCCCCACCACCTCTACCTTATTGTCTTGTCCCTAATAACAATAACATTATGGCTAGTTTCCCATATGCTCACTTCCATGGAGCTAATGTTGGGGTTGACTATGGTTTCAATGCTGCTGCTTCTTCTTCACCCCACATGACTGCTGGATTAGAAGCATTCTCCAGTAGCAGCAAAAAGGCCCCTCCTCATACTCACTCCTCCTTTTATTCTCATAATTGTCGTCCATCTTTTGATGTCATCTCGGGTGTTAGCGTCAATGAGATGGTGGGAGGGGGTTTTGGGCAGAGTAGTTTATACAGGGAAAACAGACCAAGTGATTATGAACTTCATTCTCTCAATGGCTTCTTTTACCCTCAAGAAGATAATTTCAACCCATATATAATGCCAATAAAGCAGCAGCAGCAACCACCACAGTCAAACTCAAACACGATGAATCCCAGTTTTCACAGCATCTCATCATCAAATTCCATGCCTCCAAATGTTTCCTCCGGTGAACCGTCATCGTCAGAGAACAGAGATAAAGTAGTACTGAATCGTCCTTCTCCCCCTCCATTTATCGACTTTCTCGGTGTAGGAGCCACATAA 1395 0.4416 MKAAWRNCLLYSSQQHSNNALTCSDLSSSSMGMVYADMGSLSLSSSSSEMGNNNNIGGTSLGSTFPFIRDHLPNNNTATTDNIGNDALECKASEPSADHENLIDHTQENPNENSGVSTGKEADSDQSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLSQSASYARSSMEDQNSSRGSSGTTEPPPPLPYCLVPNNNNIMASFPYAHFHGANVGVDYGFNAAASSSPHMTAGLEAFSSSSKKAPPHTHSSFYSHNCRPSFDVISGVSVNEMVGGGFGQSSLYRENRPSDYELHSLNGFFYPQEDNFNPYIMPIKQQQQPPQSNSNTMNPSFHSISSSNSMPPNVSSGEPSSSENRDKVVLNRPSPPPFIDFLGVGAT 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0800 464 MobiDBLite consensus disorder prediction 239 276 - -
Lele54g0800 464 PANTHER MYB PROTEIN-RELATED 132 334 - -
Lele54g0800 464 ProSiteProfiles Myb-like domain profile. 179 229 IPR001005 -
Lele54g0800 464 SMART sant 131 180 IPR001005 -
Lele54g0800 464 SMART sant 183 231 IPR001005 -
Lele54g0800 464 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 132 178 IPR017930 -
Lele54g0800 464 FunFam MYB transcription factor 185 256 - -
Lele54g0800 464 MobiDBLite consensus disorder prediction 402 445 - -
Lele54g0800 464 CDD SANT 135 176 IPR001005 -
Lele54g0800 464 Gene3D - 132 183 - -
Lele54g0800 464 FunFam MYB transcription factor 132 183 - -
Lele54g0800 464 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 179 233 IPR017930 -
Lele54g0800 464 SUPERFAMILY Homeodomain-like 132 225 IPR009057 -
Lele54g0800 464 CDD SANT 186 226 IPR001005 -
Lele54g0800 464 ProSiteProfiles Myb-like domain profile. 132 178 IPR001005 -
Lele54g0800 464 Gene3D - 185 260 - -
Lele54g0800 464 Pfam Myb-like DNA-binding domain 132 178 IPR001005 -
Lele54g0800 464 Pfam Myb-like DNA-binding domain 184 227 IPR001005 -
Lele54g0800 464 MobiDBLite consensus disorder prediction 402 464 - -
Lele54g0800 464 MobiDBLite consensus disorder prediction 242 268 - -
Lele54g0800 464 MobiDBLite consensus disorder prediction 103 125 - -
Lele54g0800 464 MobiDBLite consensus disorder prediction 107 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0800 Lele-ChrLele54 14706531 14708155 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0800 105 244 MYB Transcription Factor Family AT1G69560 75.168 8.55e-76 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele54g0800 Myb_DNA-binding 1.7e-14 CL0123