Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0799 ATGTCGGAGCTTAAAGACCCGGCGATTAAGCTTTTTGGGCGCACGATTTCTCTCCCACTCCACCGCCCTCCCTCCGCCTCCTCCTTTAATGATTCCTCCGATGATCATACTCCTCCTTCCTCTTCCTCTTCTCCAAGCGAAGTCAGCTCTTCCATAATACACCGCCGCCCTCTCCCCCACCCTCAGTTGTCAAGGAATGAACTCACCTCAGTACAAAATGATGATGCCTCCTACCAAAGCACAGAGGATTTAAAATCTCCCTCAGCATCTTCAGGCATTTTTGAGAATCCTAAGACTCCCTCAGCAGAAAGAGAGACTTCTTTAGTCAAATCTGCTAAACATGGAGAACAAAGTGAGACAAGCAATTTAGAAGAAAAAACTCTGAAAAAACCCGACAAGATACTTCCATGTCCGAGATGCAATAGTATGGACACCAAATTCTGTTATTTTAACAATTACAATGTCAATCAGCCCCGCCATTTCTGTAAGAACTGTCAGAGATACTGGACTGCTGGAGGAACCATGAGAAACGTGCCTGTAGGCGCAGGTCGTCGTAAGAACAAAAACTCTTCAGCCTCACAGTATCGTCAAATAATGGTTCCAAAGACCCTTCAGATTGCCAAAGAAAACTCTGCCAATGGATTGCACAATGCTGTTTTAGGAAATAGAGCAGCTGTCTTGACCTTTGGCTCGGATTCTCCTCTTTGTGATTCCATGGTTTCTGTATTAAACCTTGCAGAGAAAACACAGGACGGTGCTCTAAATGGGTTTCATTTACCTGAGCGAAATAATTTTGTCTCTTATGGGAGAGAAGATAATGGGAACGATCACTCCATTGGAGCTTCTGGTACAGCTTCAACTTCTTCAGAGAGGAAAAACAACACTGCTTCACAAGAACCTGTAAATAACATTAGCCATGGTTTCCCTCATCAATTTCCATGTTTCCCAGGTTCCTCATGGCCTTATCAATGGAACTCAGCGCAGTGGAGTTCTCCGGTCCCTCCTCCCGGATTCTGTCCTCAAGGATATCCGGCATCATTCTATTCTAGTCCTATGTATTGGGATTGTGCTTTACCAGCTTCATGGAACATACCATCCATATCTGCACAATCATCTTCTGTAAGTCAATCAGCCCCTAGCTCTGGCCCTAATTCACCTTCTCTTGGAAAACACTCGAGGGAAGGGAACATTATCAACCAAGTCAACTCACCAAAAGAAAATCCTAATATGGAGAGTGGCAGTTCAGAAAGTAGCGTCTTGATTCCCAAGACTCTACGATTCGATGATCCCAATGAAGCCGCAAAGAGTTCTATATGGTCAGCATTAGGGATGAAGAATGAGAAGGTCACTTCTCTGAATGGAGGAGGCCTTTTCAAGGCATTTCCTGCCAAGAGGGATAACAAGGATCATGTATTTGAACCATCCCTGGTGTTACAAGCCAACCCAGCAGCTTTAGCACGATCTCTTACTTTCCATGAACAGATTTAA 1488 0.4449 MSELKDPAIKLFGRTISLPLHRPPSASSFNDSSDDHTPPSSSSSPSEVSSSIIHRRPLPHPQLSRNELTSVQNDDASYQSTEDLKSPSASSGIFENPKTPSAERETSLVKSAKHGEQSETSNLEEKTLKKPDKILPCPRCNSMDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSASQYRQIMVPKTLQIAKENSANGLHNAVLGNRAAVLTFGSDSPLCDSMVSVLNLAEKTQDGALNGFHLPERNNFVSYGREDNGNDHSIGASGTASTSSERKNNTASQEPVNNISHGFPHQFPCFPGSSWPYQWNSAQWSSPVPPPGFCPQGYPASFYSSPMYWDCALPASWNIPSISAQSSSVSQSAPSSGPNSPSLGKHSREGNIINQVNSPKENPNMESGSSESSVLIPKTLRFDDPNEAAKSSIWSALGMKNEKVTSLNGGGLFKAFPAKRDNKDHVFEPSLVLQANPAALARSLTFHEQI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0799 495 MobiDBLite consensus disorder prediction 107 127 - -
Lele54g0799 495 ProSiteProfiles Zinc finger Dof-type profile. 135 189 IPR003851 GO:0003677|GO:0006355
Lele54g0799 495 MobiDBLite consensus disorder prediction 372 418 - -
Lele54g0799 495 Pfam Dof domain, zinc finger 132 189 IPR003851 GO:0003677|GO:0006355
Lele54g0799 495 MobiDBLite consensus disorder prediction 63 106 - -
Lele54g0799 495 PANTHER CYCLIC DOF FACTOR 2 1 494 IPR045174 GO:0003700|GO:0006355
Lele54g0799 495 MobiDBLite consensus disorder prediction 268 303 - -
Lele54g0799 495 MobiDBLite consensus disorder prediction 277 303 - -
Lele54g0799 495 MobiDBLite consensus disorder prediction 21 51 - -
Lele54g0799 495 MobiDBLite consensus disorder prediction 14 127 - -
Lele54g0799 495 ProSitePatterns Zinc finger Dof-type signature. 137 173 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0799 Lele-ChrLele54 14699113 14702040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0799 1 495 C2C2-Dof Transcription Factor Family AT3G47500 39.608 6.30e-91 283
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele54g0799 zf-Dof 6.4e-32 No_clan