Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0769 ATGCCGTCGGATGGCGCCGTCACCACTGGACTTAAACAGGATATGCCTTCTGTTGAGCATCAGTCCCAGATGTTCATGCTTCCGCCGAGGCTTTTTCCAGCTTCTCAGGTCTCAGCTCAGGTCGTGCAGGTCAACGAGAATCCATCTTCGTCTTTATCGGCAGCTTCCATGGCTAAACAAGCTCATCAGATACCAGATTCTGGTACGACGACGCCGTCGTCAATGAAGGAATGTCCTGACGATGGATTCAACTGGCGCAAGTATGGGCAAACACAGGTGAAAGGCAGTGAATTTCCTCGGAGTTATTACAAGTGCACGCATCCGAATTGCCCCGTGAAGAAGAAGGTGGAGAGATCCCTCGAAGATGAACATGTTGTCGCCATCATTTACAAAGGACAACATAATCATCAAGCTCCTCGCCCCACCACCATCAACAACAAGCACGAGACTGAGAACTCGAATAGTGTACGAGGAACAACAGCGTGGGAGTCATCAACAGCTGAACATGAAGCAGAAGGATCAAGTGAGAGTGAGGAAGCAGATAATGAAGTGGAGGAGAAAAATAATGATGAGCCTGAGCTTAAGAGAAGGAGGCAAGAAGCTATGGTGGTGTCTGAGGGAGTGACTTCGCATAGGACAGCCATGGAACCAAGGATTATTGTGCAGACAACAAGCGAAGTTGACCTGCTTGACGATGGATATCGATGGCGAAAATATGGCCAAAAAGTTGTCAAAGGCAACCCTTTCCCAAGGAGCTACTATAAGTGCACGACCGCAGGATGCAATGTTCGGAAGCATGTGGAGAGGGCATCCTCAGATCCTAAAGCTGTTATTACAACGTACGAAAGAAAACACAATCACGACGTGCCTGCTGCTAAAACTAACAGCCACACCATTGCCAATAACTCATCTTCATCACACCTAATGAGACCCCACAATTCCACAATAACAGATAGACACAGTTTCAATGGCGGACCTATTGGGTCCCACCAGCAGCAGCAACAACAACCACCTGTAGCACGTCTTAGGCTAAAGGAAGAACAGATAACCTAG 1053 0.4805 MPSDGAVTTGLKQDMPSVEHQSQMFMLPPRLFPASQVSAQVVQVNENPSSSLSAASMAKQAHQIPDSGTTTPSSMKECPDDGFNWRKYGQTQVKGSEFPRSYYKCTHPNCPVKKKVERSLEDEHVVAIIYKGQHNHQAPRPTTINNKHETENSNSVRGTTAWESSTAEHEAEGSSESEEADNEVEEKNNDEPELKRRRQEAMVVSEGVTSHRTAMEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPFPRSYYKCTTAGCNVRKHVERASSDPKAVITTYERKHNHDVPAAKTNSHTIANNSSSSHLMRPHNSTITDRHSFNGGPIGSHQQQQQQPPVARLRLKEEQIT 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0769 350 FunFam WRKY transcription factor 67 140 - -
Lele54g0769 350 Pfam WRKY DNA -binding domain 231 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele54g0769 350 Pfam WRKY DNA -binding domain 80 137 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele54g0769 350 ProSiteProfiles WRKY domain profile. 74 139 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele54g0769 350 MobiDBLite consensus disorder prediction 130 209 - -
Lele54g0769 350 MobiDBLite consensus disorder prediction 188 202 - -
Lele54g0769 350 SUPERFAMILY WRKY DNA-binding domain 78 139 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele54g0769 350 MobiDBLite consensus disorder prediction 316 350 - -
Lele54g0769 350 Coils Coil 177 197 - -
Lele54g0769 350 MobiDBLite consensus disorder prediction 136 168 - -
Lele54g0769 350 FunFam WRKY transcription factor 33 217 283 - -
Lele54g0769 350 SUPERFAMILY WRKY DNA-binding domain 222 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele54g0769 350 SMART WRKY_cls 230 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele54g0769 350 SMART WRKY_cls 79 138 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele54g0769 350 MobiDBLite consensus disorder prediction 316 339 - -
Lele54g0769 350 Gene3D WRKY domain 215 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele54g0769 350 Gene3D WRKY domain 66 140 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele54g0769 350 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 43 310 IPR044810 GO:0003700
Lele54g0769 350 ProSiteProfiles WRKY domain profile. 225 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0769 Lele-ChrLele54 14495999 14498058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0769 80 350 WRKY Transcription Factor Family AT2G03340 60.140 1.82e-105 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele54g0769 WRKY 8.4e-26 CL0274