Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0758 ATGATCAGATGGAAGAAGTCCCTCTGTCCTGATAGGAAATGGAGCTTTACTGTAGAAGAAGATGAGCGCTTGATAGTGGCTGTCCATCTCTTTGGACAGAAATGGAATCAGATAGCTAGATTTATTCTGCGCCGGACTCAAGCTCAGTGTAGAGACAGGTACGTCAATAGTTTGGATCCCTCTTTGAAATGGGGTGGATGGACTGAGGAAGAAGATTCGAGATTGAAAAAAGCAATTGCCAAATATGGATTCTGCTGGTCAAAGGTTGCTGCCTATGTGCCTCCACGAACTGACAGTCAATGCAGGAAGAGATGGCGGGTTCTATTTCCTGACCAAGTTCCTATGCTTCAAGCAGCTAGAAAGATGAAAAAATCTGCTCTGATCGGTAACTTTGTTGATCGTGAGTCTGAACGGCCTTGCCTTTCTTTAAACGATTTTCTTTCTTTGGCACTGTTAGATCCACCATCTGATCCAAATGCTGTGAACCTCCCTCAGAAGCGGAAGAGTATGTCAAGCAATGCTTCTGAGAAAAAGAGGCCCCAAAAACGCACAAAAAAGGCTCAAAGTTGTCTCAAGAAAGCACAGGCTGACGAGGTTGAGCCTTGTAGTGGACACGGTGCCAACAAGCCAAAGATTACTGAACCACATTTGGAGGACAACTCTGTTGAAGCTGTGCATGATCACTCCCCGCTGGACTTGGTTGTGACAACAACGAATGGCCAAGGGGATTTAGGTGGACATAATAATATTGATAAGCTAATTGAGTCGAATCAAATGTGGGAGGGTTTTAATGAATTAGATGATGAGAGCCGTCCTTGTATAACACCTTGTGAGAATCCAGAAGCAGGGACAACAGATGGGCATTGTGAGGAAATATCTTCTATGAACTCATTGAAACGCCAAACTGGAAGAAAGTCAATGCTATCTGCAATTATATCTGAGAGTGTTACTGCATTTTGA 960 0.4375 MIRWKKSLCPDRKWSFTVEEDERLIVAVHLFGQKWNQIARFILRRTQAQCRDRYVNSLDPSLKWGGWTEEEDSRLKKAIAKYGFCWSKVAAYVPPRTDSQCRKRWRVLFPDQVPMLQAARKMKKSALIGNFVDRESERPCLSLNDFLSLALLDPPSDPNAVNLPQKRKSMSSNASEKKRPQKRTKKAQSCLKKAQADEVEPCSGHGANKPKITEPHLEDNSVEAVHDHSPLDLVVTTTNGQGDLGGHNNIDKLIESNQMWEGFNELDDESRPCITPCENPEAGTTDGHCEEISSMNSLKRQTGRKSMLSAIISESVTAF 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0758 319 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 3 220 - -
Lele54g0758 319 SMART sant 12 60 IPR001005 -
Lele54g0758 319 SMART sant 63 111 IPR001005 -
Lele54g0758 319 CDD SANT 67 109 IPR001005 -
Lele54g0758 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 113 IPR017930 -
Lele54g0758 319 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 53 IPR017930 -
Lele54g0758 319 CDD SANT 15 58 IPR001005 -
Lele54g0758 319 MobiDBLite consensus disorder prediction 157 214 - -
Lele54g0758 319 Pfam Myb-like DNA-binding domain 15 56 IPR001005 -
Lele54g0758 319 Pfam Myb-like DNA-binding domain 66 108 IPR001005 -
Lele54g0758 319 ProSiteProfiles Myb-like domain profile. 59 109 IPR001005 -
Lele54g0758 319 ProSiteProfiles Myb-like domain profile. 12 58 IPR001005 -
Lele54g0758 319 Gene3D - 66 112 - -
Lele54g0758 319 Gene3D - 5 64 - -
Lele54g0758 319 SUPERFAMILY Homeodomain-like 12 105 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0758 Lele-ChrLele54 14428653 14429877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0758 3 190 MYB-Related Transcription Factor Family AT3G18100 48.677 1.68e-54 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele54g0758 Myb_DNA-binding 4.4e-15 CL0123