Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0740 ATGCTTGCTCTTGCCTTCCCTTCTGTTGCGGTGCCGATGACGACTCCGACGAGACGACAGCCTCTTCCGACGCTGTTCGGGGTTGTGGCTCATGGATTCCCTTCCTTTCTCCCCAAGCAAGTCCAACAAATCAAAGATCCTTTCGCTCGGAACTTCGCTCTCAGGATTCAGCGACTTCCCGTTCCGGTTAACTTCTCAGACAATCCCATCATGAGCAGTTGCGTGAAGCCAGTGATTCAAAACAAGGCAAATCCAATAGTTCTTCTGCATAGTTTTGACAGCTCATGTTTAGAATGGAGATATGCATATCCGTTGATCGAAGAAGCTGGTTTTGAGGCCTGGGCTATTGACATTCTTGGCTGGGGTTTCTCTGATTTAGAAAATCTTCCTTTATGTGACGTGGCCTCCAAGCGCCATCATTTCTTTCAGTTTTGGAAGTCCTACATCAGAAGGCCAATGATATTGGTAGGACCAAGCCTTGGTTCTGCTGTTGCCATCGACTTTGCCGCCAATCATCCAGAAGCTGTGGAAAAGCTTGTTTTGATTGGTTCCAGTGTATATGCAGAGGGAACCGGACTGCTAGCAACTTTACCCAGAGCGGCAGCTTATGCTGGGGTATACCTATTGAAGAGCATCCCTTCGCGCTTATATGCTACCTATTTGACCTTCTCTGACGTATCATTTAGTACCAGTCTCGACTTGGCTAGTGTGGGTCGCTTGCATTGCTTATTGCCTTGGTGGAAGGATGCTACAGCGGATTTCATGGCTAGTGGCGGTTATAATGTTGCTTCTCTGATAAAAGAGGTAAAGCACAAAACTCTCATCATTTGGGGTGAGAATGATCGCATCATCAGCAATAAATTTGGAGTGCGACTGCATTCTGAGTTGCCTGATGCAATACTACGCCAAATACCAAATTGTGGCCATTTCCCTCATCTTGAAAGGCCTGGTTCAGCTGTCAAATTGATTCTAGAGTTTGTTCAGAAGAGAGAAACCAACATAGTAAACCACTGTATTTCACATATATATGAAGGTAATTAG 1041 0.4573 MLALAFPSVAVPMTTPTRRQPLPTLFGVVAHGFPSFLPKQVQQIKDPFARNFALRIQRLPVPVNFSDNPIMSSCVKPVIQNKANPIVLLHSFDSSCLEWRYAYPLIEEAGFEAWAIDILGWGFSDLENLPLCDVASKRHHFFQFWKSYIRRPMILVGPSLGSAVAIDFAANHPEAVEKLVLIGSSVYAEGTGLLATLPRAAAYAGVYLLKSIPSRLYATYLTFSDVSFSTSLDLASVGRLHCLLPWWKDATADFMASGGYNVASLIKEVKHKTLIIWGENDRIISNKFGVRLHSELPDAILRQIPNCGHFPHLERPGSAVKLILEFVQKRETNIVNHCISHIYEGN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0740 346 PRINTS Alpha/beta hydrolase fold signature 169 182 IPR000073 -
Lele54g0740 346 PRINTS Alpha/beta hydrolase fold signature 155 168 IPR000073 -
Lele54g0740 346 PRINTS Alpha/beta hydrolase fold signature 110 125 IPR000073 -
Lele54g0740 346 PRINTS Alpha/beta hydrolase fold signature 273 287 IPR000073 -
Lele54g0740 346 Gene3D alpha/beta hydrolase 76 338 IPR029058 -
Lele54g0740 346 SUPERFAMILY alpha/beta-Hydrolases 83 329 IPR029058 -
Lele54g0740 346 PRINTS Epoxide hydrolase signature 110 125 IPR000639 GO:0003824
Lele54g0740 346 PRINTS Epoxide hydrolase signature 169 182 IPR000639 GO:0003824
Lele54g0740 346 PRINTS Epoxide hydrolase signature 90 108 IPR000639 GO:0003824
Lele54g0740 346 PRINTS Epoxide hydrolase signature 304 326 IPR000639 GO:0003824
Lele54g0740 346 PANTHER HYDROLASE 31 330 - -
Lele54g0740 346 Pfam alpha/beta hydrolase fold 84 316 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0740 Lele-ChrLele54 14319043 14322966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0740 80 327 Miscellaneous Gene Families AT1G52750 23.551 3.39e-07 50.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0740 54 14319043 14322966 Lele55g0740 55 4949443 4953912 hybridization
Lele54g0740 54 14319043 14322966 Lele56g0693 56 5184976 5188108 hybridization