Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele54g0738 ATGGCTAGAAAAGTCCCGTGCTTGCTTACACATAGACGCTTATCCTCCTCCACCCCTGAGATTCCATCCCTTTATTCCTTCCTTCAACCATCTATCTTTGCCCTTAAAAGGAACCCTTCAGTTTCTCAGGAACCCACCAAACTCCCAACTTCACCACCCCGTTCCCTAACTCCTGAAGAAGTAACCGCCCTGCAAAATACTCTTCATAAGTCTCTTATCAGCAGTGACCCAGATGAAGCATGGAAGTCTTTCAAGACTCTCACAAACAACTTAGCCTTCCCAATGTACATGATAGAGAAGAACCCTAGAATATTAGATTTTGAAACACTTCATGCCATGCTTGATTCTATGAAGTGTGCCAATGTTGCAGCCCCTGCCTTTGCCCTTGTCAAATGCATGTTGAAGAACAGGTTTTTTGTTCCATTTAGTGTCTGGGGCAAAATTGATTTCATGAAACCTGATCTTTCTGCTTGTAATGCGGCACTAGAAGGGTCTTGTCGTGACCTCGAATCAGTGAGTGATGCTGAAAAAGTTGTTGAAACAATGACACTTTTGGGTGTTAGACCAGATGAATCCAGGTTTGGATTTCTTGCTTATTTGTTTTTATTGAAGGGGCTTGAACAAAAAATAGATAAGTTAAAAATTTTAACGGGTGGCTTTGGTTTCTCAGGCAAAAAGGAATTCTATTGTAATTTAATACAAGGGTATGTTAAGTCAGACAATTTAGCATCAGTTGAATCTACAATTCTTCAAAGTTTGAAGGATAGAGATGACAAAAGTTGGAATTTTGGGGAAGAAACTTACTGTGAAGTAGTCAAGGGATATCTTCAAAATGGAAATATCAAGGGATTAGCAAATTTAATTCTTGAAGCTCAGAAGTTAGAGCCTTCGAATACCGTAGATAAATCAATAGTTTATGGTATTATTAGTGCATGTGTTAACACCAGATTATTGAACAAGGCACACAGCATCCTTGATGAAATGAATGCTCTCGGAGGCTCTGTGGGTCTCGGGGTCCATGTGCCAATCTTAAAAGCTTACTGCAAAGAAAATCGAACTGCTGAAGCTACTCAATTGGTCATGGAGATTGGTAATTCAGGCCTAAAATTGGATGTGGAAACCTATGATGCTCTAACAGATTCATCCATGACCAGCCAAGATTTTCAGTCAGCCTTTACATTATTTAGGGATATGAGGGAGGCAAGAATTTCTGATTTGAAGGGGAGTTACCTAACTATAATGACAGCTGGGAGACTGGAAGATGCTAGAAGGACATTTAGAAGGATGATATTCCTGCAATTTGAGCCAAATGATCAGACATATTTGTCCCTAATTAAGGGGTATGTCTTGGCGGAGAAATATTTTAATGTTCTAATGTTATGGAATGAGGTGAAGCGAAAATTATCAGCTGATGGACAGAAGGGGATCAAATTTGGCCACAGTCTTGTTGATGCTTTCTTATATGCTATGGTGAAGGGAGGTTTCTTTGGTGCAGTTATGCAAGTTGTGGAGAAATCTAATGAGATGAAGATTTTTGTTGATAAGTGGAGATACAAGCAAGCATTCATGGAGACTCATAAAAAACTCAAAGTGTCGAAGCCAGCTAATGGATTTTGCAATGTTGATTTTTTTCTGAGAATCTTTGCATGGTTTCTCGATCATTTGAGCTTTGAAGATGACAAAATGCTTAATGAATAG 1698 0.3916 MARKVPCLLTHRRLSSSTPEIPSLYSFLQPSIFALKRNPSVSQEPTKLPTSPPRSLTPEEVTALQNTLHKSLISSDPDEAWKSFKTLTNNLAFPMYMIEKNPRILDFETLHAMLDSMKCANVAAPAFALVKCMLKNRFFVPFSVWGKIDFMKPDLSACNAALEGSCRDLESVSDAEKVVETMTLLGVRPDESRFGFLAYLFLLKGLEQKIDKLKILTGGFGFSGKKEFYCNLIQGYVKSDNLASVESTILQSLKDRDDKSWNFGEETYCEVVKGYLQNGNIKGLANLILEAQKLEPSNTVDKSIVYGIISACVNTRLLNKAHSILDEMNALGGSVGLGVHVPILKAYCKENRTAEATQLVMEIGNSGLKLDVETYDALTDSSMTSQDFQSAFTLFRDMREARISDLKGSYLTIMTAGRLEDARRTFRRMIFLQFEPNDQTYLSLIKGYVLAEKYFNVLMLWNEVKRKLSADGQKGIKFGHSLVDAFLYAMVKGGFFGAVMQVVEKSNEMKIFVDKWRYKQAFMETHKKLKVSKPANGFCNVDFFLRIFAWFLDHLSFEDDKMLNE 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele54g0738 565 Pfam PPR repeat 308 330 IPR002885 -
Lele54g0738 565 Pfam PPR repeat 440 467 IPR002885 -
Lele54g0738 565 Pfam Pentatricopeptide repeat domain 359 404 IPR002885 -
Lele54g0738 565 PANTHER BNAC05G43320D PROTEIN 96 148 - -
Lele54g0738 565 Gene3D Tetratricopeptide repeat domain 414 539 IPR011990 GO:0005515
Lele54g0738 565 Gene3D Tetratricopeptide repeat domain 304 413 IPR011990 GO:0005515
Lele54g0738 565 Gene3D Tetratricopeptide repeat domain 62 303 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele54g0738 Lele-ChrLele54 14302231 14306069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele54g0738 153 496 Glycosyltransferase AT1G05670 21.772 7.83e-12 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele54g0738 54 14302231 14306069 Lele55g0746 55 4993708 4995672 hybridization
Lele54g0738 54 14302231 14306069 Lele56g0695 56 5199617 5202434 hybridization